Ss1.1-rcli34b_i13.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TTTTTTTTTTTTAACTTTATGGGAGGAAATTTGAACGGGTCTATGTTGCCCTTCCAGCAG CCCAATCCCTGGGCATGTCTTTCCCGTGGGGTAGGGGCTGGGGGTGTACTGGCCCTGCAT CCCCTGCTACAGACCCCCTGGGACATTTTCAGATGCTTCTGGGAAATACCCAAAGGGTGC AACTATTTATCTCTAACAAGGTATTTATCTATGTTTTTGAACTATTAAACCCTGGAGGTC CTTTAATCAGTATGATTTCTGTTGTTACTTTGTCAGAGACCTAAAAGGGTTTTCCTAATA AACAGCTGTACT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TTTTTTTTTTTTAACTTTATGGGAGGAAATTTGAACGGGTCTATGTTGCCCTTCCAGCAG CCCAATCCCTGGGCATGTCTTTCCCGTGGGGTAGGGGCTGGGGGTGTACTGGCCCTGCAT CCCCTGCTACAGACCCCCTGGGACATTTTCAGATGCTTCTGGGAAATACCCAAAGGGTGC AACTATTTATCTCTAACAAGGTATTTATCTATGTTTTTGAACTATTAAACCCTGGAGGTC CTTTAATCAGTATGATTTCTGTTGTTACTTTGTCAGAGACCTAAAAGGGTTTTCCTAATA AACAGCTGTACT |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 59-212, + strand, RNAz p=0.999488 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 59-212, + strand, RNAz p=0.999488 |
| Homologous human UTR: 1 entry(ies) | More info |
| Homologous human UTR: 1 entry(ies) | Help | Less info |
Human gene identifier and UTR site,
human gene reading direction
human gene reading direction
| 3' of BC052287, + |
| Aligned organism(s): 3 entry(ies) | More info |
| Aligned organism(s): 3 entry(ies) | Help | Less info |
| 20-283, gnl|bosTau2|chr15 (39907757-39907494) | |
| 20-283, gnl|Hg17|chr11 (35207836-35208084) | |
| 20-283, gnl|Mm7|chr2 (102664528-102664234) |
| Aligned organism(s): 3 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 20-283, gnl|bosTau2|chr15 (39907757-39907494) | |
| 20-283, gnl|Hg17|chr11 (35207836-35208084) | |
| 20-283, gnl|Mm7|chr2 (102664528-102664234) |
| Expressed library(ies): 6 entry(ies) | More info |
| Expressed library(ies): 6 entry(ies) | Help | Less info |
| eye (0.341006) | |
| nlu (0.191681) | |
| mcp (0.170648) | |
| csp (0.161186) | |
| cli (0.152812) | |
| jca (0.11396) |
| Expressed library(ies): 6 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| eye (0.341006) | |
| nlu (0.191681) | |
| mcp (0.170648) | |
| csp (0.161186) | |
| cli (0.152812) | |
| jca (0.11396) |