Ss1.1-rcli40b_m14.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CGCAAATAAAGACATAGAAAAGGCATTTCAAAAGGCCTCTCTGGACTTGTTCAACAAGAA AACCAAGCCCTCCCTCTACCTCTCCCTGCACAACGGGAATATGTACACCTCATCCCTGTA TGGATGCCTGGCCTCACTTCTGTCCCAGTGCTCTGCCCAAGACTTGGCTGGTTCCAGGAT TGGTGCCTTCTCTTATGGCTCTGGCTTGGCAGCAAGTTTCTATTCACTTCGAGTGTCCCA GGATGCTTCTCCGGGCTCCCCCCTGGAGAAGCTGGTATCCAGTGTGTCAGACCTGCCAGA ACGTCTCGCCTCCCGGAAGCGTGTCTCCCCTGAGGAGTTCACGGAAATAATGAACCAAAG AGAACAATACTACCACAAGGTGAATTTCACACCACCTGGTGACCCAAACAGCCTTTTCCC AGGCACCTGGTACCTGGAGCGAGTGGATGAGCTGTATCGCCGGAAGTATGCCCGGCATCT GGTCTAAAGATACTTGGAGAGGTTCCTGGGGAACGTGTGCTACACAACTTCTGCCCTCCA TCGATCATATACAACCCCCCACTTAACTGGTAAATAAATTGGATTGGACACAGCAGCCCC CATATGCGCTGGTCCTGTAGAGGGAGGGGCCATCCTCCGGAGTCCTTGGTGCCTTTCCCT GCCGCAGTCACTGTCATGGGCTTGTGTTGCTGGAGGAGCTCTCTGTGAAAGAAAGAGAGG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CGCAAATAAAGACATAGAAAAGGCATTTCAAAAGGCCTCTCTGGACTTGTTCAACAAGAA AACCAAGCCCTCCCTCTACCTCTCCCTGCACAACGGGAATATGTACACCTCATCCCTGTA TGGATGCCTGGCCTCACTTCTGTCCCAGTGCTCTGCCCAAGACTTGGCTGGTTCCAGGAT TGGTGCCTTCTCTTATGGCTCTGGCTTGGCAGCAAGTTTCTATTCACTTCGAGTGTCCCA GGATGCTTCTCCGGGCTCCCCCCTGGAGAAGCTGGTATCCAGTGTGTCAGACCTGCCAGA ACGTCTCGCCTCCCGGAAGCGTGTCTCCCCTGAGGAGTTCACGGAAATAATGAACCAAAG AGAACAATACTACCACAAGGTGAATTTCACACCACCTGGTGACCCAAACAGCCTTTTCCC AGGCACCTGGTACCTGGAGCGAGTGGATGAGCTGTATCGCCGGAAGTATGCCCGGCATCT GGTCTAAAGATACTTGGAGAGGTTCCTGGGGAACGTGTGCTACACAACTTCTGCCCTCCA TCGATCATATACAACCCCCCACTTAACTGGTAAATAAATTGGATTGGACACAGCAGCCCC CATATGCGCTGGTCCTGTAGAGGGAGGGGCCATCCTCCGGAGTCCTTGGTGCCTTTCCCT GCCGCAGTCACTGTCATGGGCTTGTGTTGCTGGAGGAGCTCTCTGTGAAAGAAAGAGAGG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 47 entry(ies) | More info |
| Aligned organism(s): 47 entry(ies) | Help | Less info |
| 5-150, gnl|bosTau2|chr3 (20055356-20055501) | |
| 5-150, gnl|canFam2|chr17 (59759316-59759527) | |
| 5-150, gnl|danRer3|chr24 (28610712-28610523) | |
| 5-150, gnl|dasNov1|scaffold_253167 (1595-1803) | |
| 5-150, gnl|echTel1|scaffold_319736 (68094-67884) | |
| 5-150, gnl|fr1|chrUn (171812365-171812159) | |
| 5-150, gnl|galGal2|chrZ (6727529-6727730) | |
| 5-150, gnl|hg17|chr1 (120010080-120010288) | |
| 5-150, gnl|Hg17|chr1 (120010234-120010089) | |
| 5-150, gnl|loxAfr1|scaffold_17838 (9846-9660) | |
| 5-150, gnl|mm7|chr3 (98170528-98170320) | |
| 5-150, gnl|Mm7|chr3 (98170372-98170517) | |
| 5-150, gnl|monDom2|scaffold_44 (83801-83613) | |
| 5-150, gnl|oryCun1|scaffold_201434 (105962-106170) | |
| 5-150, gnl|panTro1|chr1 (119857867-119858075) | |
| 5-150, gnl|rheMac2|chr1 (122668247-122668455) | |
| 5-150, gnl|rn3|chr2 (193099036-193098828) | |
| 5-150, gnl|tetNig1|chrUn_random (111215213-111215034) | |
| 5-150, gnl|xenTro1|scaffold_938 (79480-79660) | |
| 244-379, gnl|bosTau2|chr3 (20057442-20057576) | |
| 244-379, gnl|canFam2|chr17 (59757160-59757338) | |
| 244-379, gnl|danRer3|chr24 (28614658-28614503) | |
| 244-379, gnl|dasNov1|scaffold_155108 (814-985) | |
| 244-379, gnl|echTel1|scaffold_204950 (517-339) | |
| 244-379, gnl|fr1|chrUn (171812938-171812805) | |
| 244-379, gnl|galGal2|chr8 (4169806-4169646) | |
| 244-379, gnl|hg17|chr1 (120007190-120007369) | |
| 244-379, gnl|Hg17|chr1 (120007349-120007215) | |
| 244-379, gnl|loxAfr1|scaffold_23004 (34669-34847) | |
| 244-379, gnl|mm7|chr3 (98173997-98173818) | |
| 244-379, gnl|Mm7|chr3 (98173836-98173970) | |
| 244-379, gnl|monDom2|scaffold_44 (92528-92357) | |
| 244-379, gnl|oryCun1|scaffold_201434 (103813-103992) | |
| 244-379, gnl|panTro1|chr1 (119854756-119854935) | |
| 244-379, gnl|rheMac2|chr1 (122665364-122665543) | |
| 244-379, gnl|rn3|chr2 (193102586-193102408) | |
| 244-379, gnl|tetNig1|chrUn_random (111215680-111215576) | |
| 244-379, gnl|xenTro1|scaffold_938 (78049-78218) | |
| 485-684, gnl|bosTau2|chr3 (20064261-20064458) | |
| 485-684, gnl|canFam2|chr17 (59753740-59754254) | |
| 485-684, gnl|hg17|chr1 (120003116-120003649) | |
| 485-684, gnl|Hg17|chr1 (120003503-120003302) | |
| 485-684, gnl|mm7|chr3 (98180600-98180112) | |
| 485-684, gnl|oryCun1|scaffold_201434 (99928-100430) | |
| 485-684, gnl|panTro1|chr1 (119850680-119851213) | |
| 485-684, gnl|rheMac2|chr1 (122661335-122661868) | |
| 485-684, gnl|rn3|chr2 (193105788-193105309) |
| Aligned organism(s): 47 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 5-150, gnl|bosTau2|chr3 (20055356-20055501) | |
| 5-150, gnl|canFam2|chr17 (59759316-59759527) | |
| 5-150, gnl|danRer3|chr24 (28610712-28610523) | |
| 5-150, gnl|dasNov1|scaffold_253167 (1595-1803) | |
| 5-150, gnl|echTel1|scaffold_319736 (68094-67884) | |
| 5-150, gnl|fr1|chrUn (171812365-171812159) | |
| 5-150, gnl|galGal2|chrZ (6727529-6727730) | |
| 5-150, gnl|hg17|chr1 (120010080-120010288) | |
| 5-150, gnl|Hg17|chr1 (120010234-120010089) | |
| 5-150, gnl|loxAfr1|scaffold_17838 (9846-9660) | |
| 5-150, gnl|mm7|chr3 (98170528-98170320) | |
| 5-150, gnl|Mm7|chr3 (98170372-98170517) | |
| 5-150, gnl|monDom2|scaffold_44 (83801-83613) | |
| 5-150, gnl|oryCun1|scaffold_201434 (105962-106170) | |
| 5-150, gnl|panTro1|chr1 (119857867-119858075) | |
| 5-150, gnl|rheMac2|chr1 (122668247-122668455) | |
| 5-150, gnl|rn3|chr2 (193099036-193098828) | |
| 5-150, gnl|tetNig1|chrUn_random (111215213-111215034) | |
| 5-150, gnl|xenTro1|scaffold_938 (79480-79660) | |
| 244-379, gnl|bosTau2|chr3 (20057442-20057576) | |
| 244-379, gnl|canFam2|chr17 (59757160-59757338) | |
| 244-379, gnl|danRer3|chr24 (28614658-28614503) | |
| 244-379, gnl|dasNov1|scaffold_155108 (814-985) | |
| 244-379, gnl|echTel1|scaffold_204950 (517-339) | |
| 244-379, gnl|fr1|chrUn (171812938-171812805) | |
| 244-379, gnl|galGal2|chr8 (4169806-4169646) | |
| 244-379, gnl|hg17|chr1 (120007190-120007369) | |
| 244-379, gnl|Hg17|chr1 (120007349-120007215) | |
| 244-379, gnl|loxAfr1|scaffold_23004 (34669-34847) | |
| 244-379, gnl|mm7|chr3 (98173997-98173818) | |
| 244-379, gnl|Mm7|chr3 (98173836-98173970) | |
| 244-379, gnl|monDom2|scaffold_44 (92528-92357) | |
| 244-379, gnl|oryCun1|scaffold_201434 (103813-103992) | |
| 244-379, gnl|panTro1|chr1 (119854756-119854935) | |
| 244-379, gnl|rheMac2|chr1 (122665364-122665543) | |
| 244-379, gnl|rn3|chr2 (193102586-193102408) | |
| 244-379, gnl|tetNig1|chrUn_random (111215680-111215576) | |
| 244-379, gnl|xenTro1|scaffold_938 (78049-78218) | |
| 485-684, gnl|bosTau2|chr3 (20064261-20064458) | |
| 485-684, gnl|canFam2|chr17 (59753740-59754254) | |
| 485-684, gnl|hg17|chr1 (120003116-120003649) | |
| 485-684, gnl|Hg17|chr1 (120003503-120003302) | |
| 485-684, gnl|mm7|chr3 (98180600-98180112) | |
| 485-684, gnl|oryCun1|scaffold_201434 (99928-100430) | |
| 485-684, gnl|panTro1|chr1 (119850680-119851213) | |
| 485-684, gnl|rheMac2|chr1 (122661335-122661868) | |
| 485-684, gnl|rn3|chr2 (193105788-193105309) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| col (0.390016) | |
| cli (0.152812) |