Non-Coding RNA Search

Ss1.1-rcly06b_k2.5

Sequence:


               
               GGGCTGAGGACGAGTGCAGCTCATGGCAGGAGGAGCTGAGAGGAGGAAGCTTTTGTGCAC
AGCAGGAAGTGGCTTTGCTGCCCTTTCTACCAAAATCGAGTTTCAGGAAAATGGCTCTGT
GCTCTTTGTTTTTAGTGACACTTTGCTTGTGTCCTGTGAGTTGTAGCTCCCCTTTATCTG
GCACTGCTAAGCTTTCCAAGGTATCCTTCCCGTCCAGCTGGTGTTTGGTGGTCCATCGTG
GCAGGGTTGAGACACCTCGGGGACTGCCAGGGGGGTCCCTGCTCTCCTTCTCCAGGCATC
GCCTGCACCATCCTTTTCCAGGAGGGACGAAGGCACAGCCCCTTTCCTCCTATCAGCCAC
TTTGTACAGCTCTTCACTTTTTAGCACTTCGGTCTGTTTACTGAGGCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGGCTGAGGACGAGTGCAGCTCATGGCAGGAGGAGCTGAGAGGAGGAAGCTTTTGTGCAC
AGCAGGAAGTGGCTTTGCTGCCCTTTCTACCAAAATCGAGTTTCAGGAAAATGGCTCTGT
GCTCTTTGTTTTTAGTGACACTTTGCTTGTGTCCTGTGAGTTGTAGCTCCCCTTTATCTG
GCACTGCTAAGCTTTCCAAGGTATCCTTCCCGTCCAGCTGGTGTTTGGTGGTCCATCGTG
GCAGGGTTGAGACACCTCGGGGACTGCCAGGGGGGTCCCTGCTCTCCTTCTCCAGGCATC
GCCTGCACCATCCTTTTCCAGGAGGGACGAAGGCACAGCCCCTTTCCTCCTATCAGCCAC
TTTGTACAGCTCTTCACTTTTTAGCACTTCGGTCTGTTTACTGAGGCC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-394, gnl|bosTau2|chr8 (37916650-37916259)
               

               
               1-394, gnl|Hg17|chr4 (53304083-53303715)
               

               
               1-394, gnl|Mm7|chr5 (73419610-73419247)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-394, gnl|bosTau2|chr8 (37916650-37916259)
               

               
               1-394, gnl|Hg17|chr4 (53304083-53303715)
               

               
               1-394, gnl|Mm7|chr5 (73419610-73419247)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cly (0.120642)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cly (0.120642)

	1-394, gnl\|bosTau2\|chr8 (37916650-37916259)
	1-394, gnl\|Hg17\|chr4 (53304083-53303715)
	1-394, gnl\|Mm7\|chr5 (73419610-73419247)