Non-Coding RNA Search

Ss1.1-rcly15b_a20.5

Sequence:


               
               TGAGGTTTCCGGCCACAAGAAGGGCCCCAGGCCCACTCAGCCCATCAGGCAGGATACAGA
TGATGGACATGATTATGAAGAAATACTCGAGAAATTTCCAAAAACCCTCTAGGTGCTACA
GGAACCTCACTTCCTAACTGCTGCTTCTCAGGGAATCTGAGATACCAGCCAACTGTTACA
AGCCTTTAGAAGACCTTGGACAAGGTCTCTCAGACCTCGGACCGCGGACAAGGAGTGGCC
GTGTGGGGATTGGCTGCAAATGGGATGGACACTACACCAGCTCCTTCCGGGTCTAGGTTC
CTGCCATGGAGGGCGGGCTTCTCTGGGCCCAGACCTTGCATTTGGCTCCCTCAGCCTTGG
AGCTTTGGTATTTAGTAGCCAACTGGGTTCTACTCAATCCTGTGTCCCCCATACCAGTTG
TCCCACTGGTTACTGCAAAAAGGGATCCAAGACACTGGCCGCCCTGGCGATGGCAGGACT
GTGCCTCCTGCCTCTCAGTAAAAGGGACTCAATCCTGACCACACATGGCACTGAGAGCCT
TTTTGAATGTTTGCTGCTCCCTGCTCCACTCTCTCCTCCCTTTCCCCCTCCCCCAGTCTG
GCCCTGAGGGACCCGGACTGTCTTCCTCATGTCTGCGGCACCCAGCACAGGACACCTGTA
GATGACTATCCAAGGTTACTTTAAGACCGTAGAATAAAAATGACACCTGAGCTTCTGGAA
AAATAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGAGGTTTCCGGCCACAAGAAGGGCCCCAGGCCCACTCAGCCCATCAGGCAGGATACAGA
TGATGGACATGATTATGAAGAAATACTCGAGAAATTTCCAAAAACCCTCTAGGTGCTACA
GGAACCTCACTTCCTAACTGCTGCTTCTCAGGGAATCTGAGATACCAGCCAACTGTTACA
AGCCTTTAGAAGACCTTGGACAAGGTCTCTCAGACCTCGGACCGCGGACAAGGAGTGGCC
GTGTGGGGATTGGCTGCAAATGGGATGGACACTACACCAGCTCCTTCCGGGTCTAGGTTC
CTGCCATGGAGGGCGGGCTTCTCTGGGCCCAGACCTTGCATTTGGCTCCCTCAGCCTTGG
AGCTTTGGTATTTAGTAGCCAACTGGGTTCTACTCAATCCTGTGTCCCCCATACCAGTTG
TCCCACTGGTTACTGCAAAAAGGGATCCAAGACACTGGCCGCCCTGGCGATGGCAGGACT
GTGCCTCCTGCCTCTCAGTAAAAGGGACTCAATCCTGACCACACATGGCACTGAGAGCCT
TTTTGAATGTTTGCTGCTCCCTGCTCCACTCTCTCCTCCCTTTCCCCCTCCCCCAGTCTG
GCCCTGAGGGACCCGGACTGTCTTCCTCATGTCTGCGGCACCCAGCACAGGACACCTGTA
GATGACTATCCAAGGTTACTTTAAGACCGTAGAATAAAAATGACACCTGAGCTTCTGGAA
AAATAAAAAAAA

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               57-729, gnl|bosTau2|chr2 (76072526-76073186)
               

               
               57-729, gnl|Hg17|chr1 (27896517-27897338)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               57-729, gnl|bosTau2|chr2 (76072526-76073186)
               

               
               57-729, gnl|Hg17|chr1 (27896517-27897338)

Expressed library(ies): 7 entry(ies)

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Expressed library(ies): 7 entry(ies)

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               cly (0.241284)
               

               
               nlu (0.191681)
               

               
               fhi (0.169578)
               

               
               csp (0.161186)
               

               
               clu (0.119646)
               

               
               nbm (0.0993246)
               

               
               jej (0.0989218)

Expressed library(ies): 7 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cly (0.241284)
               

               
               nlu (0.191681)
               

               
               fhi (0.169578)
               

               
               csp (0.161186)
               

               
               clu (0.119646)
               

               
               nbm (0.0993246)
               

               
               jej (0.0989218)

	57-729, gnl\|bosTau2\|chr2 (76072526-76073186)
	57-729, gnl\|Hg17\|chr1 (27896517-27897338)

	cly (0.241284)
	nlu (0.191681)
	fhi (0.169578)
	csp (0.161186)
	clu (0.119646)
	nbm (0.0993246)
	jej (0.0989218)