Ss1.1-rcly18b_e13.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TAGCCCTAGGACACGATCCAGGGGAATGATGCCAGAAGCTTCTTCTGGAGACATGATTGG TGGGTGAGACTGATTGAGGTGATAGAGTGGTATGGGGCTGGCCGGGCTGGCGGCTGCAGC CCTGGGCCGGGCCACCTCGGACGGGATGTCAGGACCAAGACCTGTTGTCCTGAGCGGACC CTCAGGGGCTGGGAAGAGCACCCTGCTGAAGAAACTCCTTCAGGAACATAGCAGCATCTT CGGCTTCAGCGTGTCCCACACTACAAGAGATCCGAGACCAGGAGAAGAGAACGGCAAAGA CTACTACTTTGTGACCAGGGAGGTGATGCAGCGGGACATTGCTGCTGGAGACTTCATCGA GCATGCTGAGTTCTCAGGGAACTTGTATGGGACCAGCAAAGCAGCTGTGCGGGCCGTGCA GGCCATGAACCGCATCTGTGTGCTGGATGTGGACCTGCAGGGTGTGCGCAACATCAAGAA GACTGACCTGCAGCCCATCTACATCTTCGTGCAGCCACCCTCACTGGATGTCCTGGAGCA GCGGTTGCGGCAGCGGAACACAGAGACAGAGGAGAGCCTGGCTAAGCGTCTGGCTGCCGC CAAGGCTGACATGGAAAGTAGCAAGGAGCCCGGCTTGTTTGACCTGATCATCATCAACGA CAGTCTGGACAAGGCCTACTGGGCCCTGAAGGAGGCGCTCTCTGAGGAAATAAAGAAGGC TCAAGCAACGGGTCACTCCTGAGGAGCCCCACTGGCTAAATCCTCCCAGGAGGGGCTTAG GGTCTGGCACCCACCCCCCATGGGCCACGGTTTCCCAGCAGTGGCTCTGCTCACCTCAGC CAGAACCCAGGAATTGGGCTGCTGCCCATCTTCCCTTGCTCCCCCACCATGGTTGGAGGA CCTTGTCTCTCACCCCTACCCCCATGCCCATTTCTAGGCTCCTTCCCCCACCCCACCCCT TTCCCCCCAAATAAAGAACTATTGGTTTAAAAAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TAGCCCTAGGACACGATCCAGGGGAATGATGCCAGAAGCTTCTTCTGGAGACATGATTGG TGGGTGAGACTGATTGAGGTGATAGAGTGGTATGGGGCTGGCCGGGCTGGCGGCTGCAGC CCTGGGCCGGGCCACCTCGGACGGGATGTCAGGACCAAGACCTGTTGTCCTGAGCGGACC CTCAGGGGCTGGGAAGAGCACCCTGCTGAAGAAACTCCTTCAGGAACATAGCAGCATCTT CGGCTTCAGCGTGTCCCACACTACAAGAGATCCGAGACCAGGAGAAGAGAACGGCAAAGA CTACTACTTTGTGACCAGGGAGGTGATGCAGCGGGACATTGCTGCTGGAGACTTCATCGA GCATGCTGAGTTCTCAGGGAACTTGTATGGGACCAGCAAAGCAGCTGTGCGGGCCGTGCA GGCCATGAACCGCATCTGTGTGCTGGATGTGGACCTGCAGGGTGTGCGCAACATCAAGAA GACTGACCTGCAGCCCATCTACATCTTCGTGCAGCCACCCTCACTGGATGTCCTGGAGCA GCGGTTGCGGCAGCGGAACACAGAGACAGAGGAGAGCCTGGCTAAGCGTCTGGCTGCCGC CAAGGCTGACATGGAAAGTAGCAAGGAGCCCGGCTTGTTTGACCTGATCATCATCAACGA CAGTCTGGACAAGGCCTACTGGGCCCTGAAGGAGGCGCTCTCTGAGGAAATAAAGAAGGC TCAAGCAACGGGTCACTCCTGAGGAGCCCCACTGGCTAAATCCTCCCAGGAGGGGCTTAG GGTCTGGCACCCACCCCCCATGGGCCACGGTTTCCCAGCAGTGGCTCTGCTCACCTCAGC CAGAACCCAGGAATTGGGCTGCTGCCCATCTTCCCTTGCTCCCCCACCATGGTTGGAGGA CCTTGTCTCTCACCCCTACCCCCATGCCCATTTCTAGGCTCCTTCCCCCACCCCACCCCT TTCCCCCCAAATAAAGAACTATTGGTTTAAAAAAAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
| 143-257, gnl|bosTau2|chr7 (1690842-1690956) | |
| 143-257, gnl|canFam2|chr14 (3773239-3773100) | |
| 143-257, gnl|danRer3|chr4 (3788256-3788397) | |
| 143-257, gnl|echTel1|scaffold_294115 (86137-86002) | |
| 143-257, gnl|fr1|chrUn (126324288-126324143) | |
| 143-257, gnl|hg17|chr1 (224639927-224640068) | |
| 143-257, gnl|Hg17|chr1 (224639946-224640060) | |
| 143-257, gnl|mm7|chr11 (59268452-59268314) | |
| 143-257, gnl|Mm7|chr11 (59268433-59268319) | |
| 143-257, gnl|monDom2|scaffold_42 (10492564-10492450) | |
| 143-257, gnl|oryCun1|scaffold_60792 (191-317) | |
| 143-257, gnl|panTro1|chr1 (208427937-208428078) | |
| 143-257, gnl|rheMac2|chr1 (142236850-142236709) | |
| 143-257, gnl|rn3|chr10 (45505765-45505627) | |
| 143-257, gnl|tetNig1|chr15_random (1022792-1022654) | |
| 393-536, gnl|bosTau2|chr7 (1692681-1692824) | |
| 393-536, gnl|Hg17|chr1 (224641838-224641981) | |
| 393-536, gnl|Mm7|chr11 (59266881-59266738) | |
| 698-948, gnl|bosTau2|chr7 (1693369-1693618) | |
| 698-948, gnl|Hg17|chr1 (224643090-224643318) | |
| 698-948, gnl|Mm7|chr11 (59265743-59265479) |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 143-257, gnl|bosTau2|chr7 (1690842-1690956) | |
| 143-257, gnl|canFam2|chr14 (3773239-3773100) | |
| 143-257, gnl|danRer3|chr4 (3788256-3788397) | |
| 143-257, gnl|echTel1|scaffold_294115 (86137-86002) | |
| 143-257, gnl|fr1|chrUn (126324288-126324143) | |
| 143-257, gnl|hg17|chr1 (224639927-224640068) | |
| 143-257, gnl|Hg17|chr1 (224639946-224640060) | |
| 143-257, gnl|mm7|chr11 (59268452-59268314) | |
| 143-257, gnl|Mm7|chr11 (59268433-59268319) | |
| 143-257, gnl|monDom2|scaffold_42 (10492564-10492450) | |
| 143-257, gnl|oryCun1|scaffold_60792 (191-317) | |
| 143-257, gnl|panTro1|chr1 (208427937-208428078) | |
| 143-257, gnl|rheMac2|chr1 (142236850-142236709) | |
| 143-257, gnl|rn3|chr10 (45505765-45505627) | |
| 143-257, gnl|tetNig1|chr15_random (1022792-1022654) | |
| 393-536, gnl|bosTau2|chr7 (1692681-1692824) | |
| 393-536, gnl|Hg17|chr1 (224641838-224641981) | |
| 393-536, gnl|Mm7|chr11 (59266881-59266738) | |
| 698-948, gnl|bosTau2|chr7 (1693369-1693618) | |
| 698-948, gnl|Hg17|chr1 (224643090-224643318) | |
| 698-948, gnl|Mm7|chr11 (59265743-59265479) |
| Expressed library(ies): 19 entry(ies) | More info |
| Expressed library(ies): 19 entry(ies) | Help | Less info |
| fty (0.351679) | |
| cga (0.279096) | |
| eep (0.245128) | |
| med (0.232504) | |
| ecc (0.23007) | |
| fcc (0.197785) | |
| ton (0.1755) | |
| cli (0.152812) | |
| cag (0.151194) | |
| hyp (0.142837) | |
| lnt (0.142308) | |
| nca (0.136874) | |
| ute (0.132784) | |
| cov (0.132153) | |
| cly (0.120642) | |
| ebs (0.118301) | |
| jca (0.11396) | |
| nbm (0.0993246) | |
| jej (0.0989218) |
| Expressed library(ies): 19 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| fty (0.351679) | |
| cga (0.279096) | |
| eep (0.245128) | |
| med (0.232504) | |
| ecc (0.23007) | |
| fcc (0.197785) | |
| ton (0.1755) | |
| cli (0.152812) | |
| cag (0.151194) | |
| hyp (0.142837) | |
| lnt (0.142308) | |
| nca (0.136874) | |
| ute (0.132784) | |
| cov (0.132153) | |
| cly (0.120642) | |
| ebs (0.118301) | |
| jca (0.11396) | |
| nbm (0.0993246) | |
| jej (0.0989218) |