Non-Coding RNA Search

Ss1.1-rcly23b_b11.5

Sequence:


               
               ATTACCTGCTTCTTGGTAGATCGTGATACCAAGGGCCTCCGTGTAGGGAAACCGGAGAAC
AAATGGGGAATCAGAGCATCTTCTACCTGCCCGGTAACACTTGAAAATGCCAAGGTTCCA
GAAGCCAATATCGTGGGACAGATGGGACATGGCTATAAGTACGCCATTCAGAGTCTTAAT
AAAGGTAGAATAGGAATTGCGGCACAGGTTAGTCAGATTTTAGCACTGTTAACTTGACTC
TTCCACACACTGTTGATTAAAATGTAGAAAGAAAACAAGGCAGTGTAGTCGGTGAGTGTG
TGACTGTGCGCAAGCTTGTGACACAAGATGGCGCTCTTCCCTTCCGTGAGGGTTGCTGTA
GAATTTCTCCCCGTCAATTACACAGTCCTGAGAACCAAACAGTGGCTTAGTGCTAACAGT
TTTTCTGCTTCCAGAACGTGAAAGTATTATCTAATACCTGGAACAGTAACTTCTGAAATA
AATTACAAATTAAAGATGATGTTTTTTTTTTCAATTGAGCTATTCAAAGCATGCAATTCA
TTCTTTTTAAAATTAAGAATAATA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATTACCTGCTTCTTGGTAGATCGTGATACCAAGGGCCTCCGTGTAGGGAAACCGGAGAAC
AAATGGGGAATCAGAGCATCTTCTACCTGCCCGGTAACACTTGAAAATGCCAAGGTTCCA
GAAGCCAATATCGTGGGACAGATGGGACATGGCTATAAGTACGCCATTCAGAGTCTTAAT
AAAGGTAGAATAGGAATTGCGGCACAGGTTAGTCAGATTTTAGCACTGTTAACTTGACTC
TTCCACACACTGTTGATTAAAATGTAGAAAGAAAACAAGGCAGTGTAGTCGGTGAGTGTG
TGACTGTGCGCAAGCTTGTGACACAAGATGGCGCTCTTCCCTTCCGTGAGGGTTGCTGTA
GAATTTCTCCCCGTCAATTACACAGTCCTGAGAACCAAACAGTGGCTTAGTGCTAACAGT
TTTTCTGCTTCCAGAACGTGAAAGTATTATCTAATACCTGGAACAGTAACTTCTGAAATA
AATTACAAATTAAAGATGATGTTTTTTTTTTCAATTGAGCTATTCAAAGCATGCAATTCA
TTCTTTTTAAAATTAAGAATAATA

Aligned organism(s): 6 entry(ies)

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Aligned organism(s): 6 entry(ies)

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               113-349, gnl|bosTau2|chr26 (27912152-27911917)
               

               
               113-349, gnl|Hg17|chr10 (124793897-124794114)
               

               
               113-349, gnl|Mm7|chr7 (127791249-127791475)
               


               
               353-562, gnl|bosTau2|chr26 (27911890-27911673)
               

               
               353-562, gnl|Hg17|chr10 (124794134-124794354)
               

               
               353-562, gnl|Mm7|chr7 (127791499-127791716)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               113-349, gnl|bosTau2|chr26 (27912152-27911917)
               

               
               113-349, gnl|Hg17|chr10 (124793897-124794114)
               

               
               113-349, gnl|Mm7|chr7 (127791249-127791475)
               


               
               353-562, gnl|bosTau2|chr26 (27911890-27911673)
               

               
               353-562, gnl|Hg17|chr10 (124794134-124794354)
               

               
               353-562, gnl|Mm7|chr7 (127791499-127791716)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               cly (0.120642)
               

               
               pgl (0.118483)

Expressed library(ies): 2 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cly (0.120642)
               

               
               pgl (0.118483)

	113-349, gnl\|bosTau2\|chr26 (27912152-27911917)
	113-349, gnl\|Hg17\|chr10 (124793897-124794114)
	113-349, gnl\|Mm7\|chr7 (127791249-127791475)

	353-562, gnl\|bosTau2\|chr26 (27911890-27911673)
	353-562, gnl\|Hg17\|chr10 (124794134-124794354)
	353-562, gnl\|Mm7\|chr7 (127791499-127791716)