Non-Coding RNA Search

Ss1.1-rcly23b_f1.5

Sequence:


               
               CTCTGGCCGAGAAGCTCCAGGGAGCCGCGGACCTGAACGGAGCTTGCGGGGCCCTGCCGG
GCGGCGGCGGCGGCGGCGGGGGCGGCGGGGGCGGCGGGCTGCCCAAGCAGAGCCCCTTCC
TCTACGCCACCGCCTTCTGGCCCAAGAGCTCGGCGGCCGCGGCGGCCGCGGCGGCGGCGG
CGGCGGCGGGGCCCCTGCAGTTGCAGCTGCCCTCGGCGCTGACGCTGCTGCCGCCGTCCT
TCACGTCGCTGTGCCTGCCGGCGCAGAACTGGTGCGCCAAGTGCAATGCCTCTTTCCGCA
TGACCTCCGACCTGGTGTACCACATGCGGTCGCATCACAAGAAGGAGTACGCGCTGGAGC
CCTTGGTGAAGCGAAGGCGGGAGGAGAAACTCAAGTGCCCCATTTGCAACGAGTCCTTCC
GAGAGCGCCACCACCTCTCCAGGCACATGACCTCGCATAATTGACCCTGGCGCAGAAGAC
CCCAGCTTTCCACGCGCGCACACTCACAGGCGAGCCACCTGCAGGGACAAACACTCGAGG
ACATCCCCCACCTCTTGGTGACCGGAAACGTCGTCGCACCCAGAGAGGCAGACACACACA
CACACACACACACACACTCACACAGTGCTCTCTCCCCGCCTTTACCTCCAGACGTTGACC
CGAGCCCTACACACACACACACACACACACACACACACACACAGAGGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTCTGGCCGAGAAGCTCCAGGGAGCCGCGGACCTGAACGGAGCTTGCGGGGCCCTGCCGG
GCGGCGGCGGCGGCGGCGGGGGCGGCGGGGGCGGCGGGCTGCCCAAGCAGAGCCCCTTCC
TCTACGCCACCGCCTTCTGGCCCAAGAGCTCGGCGGCCGCGGCGGCCGCGGCGGCGGCGG
CGGCGGCGGGGCCCCTGCAGTTGCAGCTGCCCTCGGCGCTGACGCTGCTGCCGCCGTCCT
TCACGTCGCTGTGCCTGCCGGCGCAGAACTGGTGCGCCAAGTGCAATGCCTCTTTCCGCA
TGACCTCCGACCTGGTGTACCACATGCGGTCGCATCACAAGAAGGAGTACGCGCTGGAGC
CCTTGGTGAAGCGAAGGCGGGAGGAGAAACTCAAGTGCCCCATTTGCAACGAGTCCTTCC
GAGAGCGCCACCACCTCTCCAGGCACATGACCTCGCATAATTGACCCTGGCGCAGAAGAC
CCCAGCTTTCCACGCGCGCACACTCACAGGCGAGCCACCTGCAGGGACAAACACTCGAGG
ACATCCCCCACCTCTTGGTGACCGGAAACGTCGTCGCACCCAGAGAGGCAGACACACACA
CACACACACACACACACTCACACAGTGCTCTCTCCCCGCCTTTACCTCCAGACGTTGACC
CGAGCCCTACACACACACACACACACACACACACACACACACAGAGGA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|47228855|emb|CAG09370.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|47228855|emb|CAG09370.1|

Aligned organism(s): 6 entry(ies)

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Aligned organism(s): 6 entry(ies)

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               3-703, gnl|bosTau2|chr6 (53001231-53001896)
               

               
               3-703, gnl|Hg17|chr4 (81481428-81482099)
               

               
               3-703, gnl|Mm7|chr5 (97401088-97401744)
               


               
               225-465, gnl|bosTau2|chr28 (31500934-31500691)
               

               
               225-465, gnl|Hg17|chr10 (47991319-47991562)
               

               
               225-465, gnl|Mm7|chr14 (31401484-31401241)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-703, gnl|bosTau2|chr6 (53001231-53001896)
               

               
               3-703, gnl|Hg17|chr4 (81481428-81482099)
               

               
               3-703, gnl|Mm7|chr5 (97401088-97401744)
               


               
               225-465, gnl|bosTau2|chr28 (31500934-31500691)
               

               
               225-465, gnl|Hg17|chr10 (47991319-47991562)
               

               
               225-465, gnl|Mm7|chr14 (31401484-31401241)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cly (0.120642)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cly (0.120642)

	3-703, gnl\|bosTau2\|chr6 (53001231-53001896)
	3-703, gnl\|Hg17\|chr4 (81481428-81482099)
	3-703, gnl\|Mm7\|chr5 (97401088-97401744)

	225-465, gnl\|bosTau2\|chr28 (31500934-31500691)
	225-465, gnl\|Hg17\|chr10 (47991319-47991562)
	225-465, gnl\|Mm7\|chr14 (31401484-31401241)