Non-Coding RNA Search

Ss1.1-rcly33b_e2.5

Sequence:


               
               ATTACCTGTCAAGAAACTGTATTCTCCCTTCTTAAAAGCTATCTATCTAATGTGTAAAAT
ATATTTGAAAGAAATTTTTTGGAAGGTTTTTAATGTTCATTGATTAAACTAATCACCAGT
GATTTGTTAATAATGAACTGCAATCAGGGTATCGAGTAGATTTCCCAAAGGCCTTTCCGG
TCCAGGGGCTGGGGCTCGCTGCCGCCCCGTGTCCAGAAGGGAGTTGCCGGGAGCGCTCTT
GTTTCTGCTGGCCCTGGCCGATGGGTGTCCGAGAGAACCGAACTGCCTTGCTGGGGCAGA
GACGGTTCCTCTTTGCTTTATTTTATTGTGTTATTTTACAGCTGAAGTGTCTGCCTTCAG
CGTTGGAGTCCTCAGCCTTTTCTGTGCAGACGCTGGCCTTTAACCCCAGAGGCTGCTTTG
CTGTGGTTCTGGAACTGCTTTTTCTTTTTCAAAGGAAATGTGTGGCTTGTTCTGTGGGTT
TGTAGGCATATTCATGAGGTGCTCTTCCTTCTGTATCCCCTGGAGACAAATGGGCTGGGG
GATCGCCAGGACCGAGGTTGCAAAGCACAAACTTGGTAGCCTGTAGTTTGTAGACAGAGG
ACAGTAAACCCTTATTAGAGAGTCAGGGCTAAGCTGTGCAGCAAGTGGAAAAGGGTGTTT
GTGCCACGATGAACCCCGTGGATCTAAAACCTGCTTGTTATGTCACGGGGGCGTTCGTTA
CACGAGCCGTGCGAACTTCCCAGGAAATAGGCAGTGAGGTGACGGGAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATTACCTGTCAAGAAACTGTATTCTCCCTTCTTAAAAGCTATCTATCTAATGTGTAAAAT
ATATTTGAAAGAAATTTTTTGGAAGGTTTTTAATGTTCATTGATTAAACTAATCACCAGT
GATTTGTTAATAATGAACTGCAATCAGGGTATCGAGTAGATTTCCCAAAGGCCTTTCCGG
TCCAGGGGCTGGGGCTCGCTGCCGCCCCGTGTCCAGAAGGGAGTTGCCGGGAGCGCTCTT
GTTTCTGCTGGCCCTGGCCGATGGGTGTCCGAGAGAACCGAACTGCCTTGCTGGGGCAGA
GACGGTTCCTCTTTGCTTTATTTTATTGTGTTATTTTACAGCTGAAGTGTCTGCCTTCAG
CGTTGGAGTCCTCAGCCTTTTCTGTGCAGACGCTGGCCTTTAACCCCAGAGGCTGCTTTG
CTGTGGTTCTGGAACTGCTTTTTCTTTTTCAAAGGAAATGTGTGGCTTGTTCTGTGGGTT
TGTAGGCATATTCATGAGGTGCTCTTCCTTCTGTATCCCCTGGAGACAAATGGGCTGGGG
GATCGCCAGGACCGAGGTTGCAAAGCACAAACTTGGTAGCCTGTAGTTTGTAGACAGAGG
ACAGTAAACCCTTATTAGAGAGTCAGGGCTAAGCTGTGCAGCAAGTGGAAAAGGGTGTTT
GTGCCACGATGAACCCCGTGGATCTAAAACCTGCTTGTTATGTCACGGGGGCGTTCGTTA
CACGAGCCGTGCGAACTTCCCAGGAAATAGGCAGTGAGGTGACGGGAG

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               2-768, gnl|bosTau2|chr5 (72977972-72978721)
               

               
               2-768, gnl|Hg17|chr22 (43901234-43902040)
               

               
               2-768, gnl|Mm7|chr15 (85022317-85023069)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-768, gnl|bosTau2|chr5 (72977972-72978721)
               

               
               2-768, gnl|Hg17|chr22 (43901234-43902040)
               

               
               2-768, gnl|Mm7|chr15 (85022317-85023069)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cly (0.120642)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cly (0.120642)

	2-768, gnl\|bosTau2\|chr5 (72977972-72978721)
	2-768, gnl\|Hg17\|chr22 (43901234-43902040)
	2-768, gnl\|Mm7\|chr15 (85022317-85023069)