Non-Coding RNA Search

Ss1.1-rcly35b_i16.5

Sequence:


               
               GGCCATGAAGGCCCTGCCCTGTGAAGTCAGCACCTATGCCAAGTCTCGGAAGGACATTGG
TGTCCAAACACATGTGTGGGTCCGAGGAGGCTGTGAATCTGGGCGCTGCGACCGCTGTCA
GAAAAAGATCCGGATCTACCACAGTCTGGTTGGGCTGCATTGTGTGTGGTGCCACCTAGA
GATCCATGATGACTGCCTACCAGCCATGGGCCATGAGTGTGACTGCGGGCTGCTCCGTGA
TCACATCCTGCCTCCATCTTCCATCTATCCCAGTGTCCTGGCCTCTGGACAGGAACGTAA
AGTTAGCAAAACAAGCCAGAAGACCACAGATGATTTAAATTTGAGCACCTCTGAGGCTCT
GCGGATTGACCCCGTTTCTAACACGCACCCACTTCTGGTCTTTGTCAACCCCAAGAGTGG
CGGGAAGCAAGGGGAGAGGGTGCTTTGGAAATTCCAGTATCTACTAAACCCTCGACAAGT
GTTCAACCTCCTCAAGGACGGTCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGCCATGAAGGCCCTGCCCTGTGAAGTCAGCACCTATGCCAAGTCTCGGAAGGACATTGG
TGTCCAAACACATGTGTGGGTCCGAGGAGGCTGTGAATCTGGGCGCTGCGACCGCTGTCA
GAAAAAGATCCGGATCTACCACAGTCTGGTTGGGCTGCATTGTGTGTGGTGCCACCTAGA
GATCCATGATGACTGCCTACCAGCCATGGGCCATGAGTGTGACTGCGGGCTGCTCCGTGA
TCACATCCTGCCTCCATCTTCCATCTATCCCAGTGTCCTGGCCTCTGGACAGGAACGTAA
AGTTAGCAAAACAAGCCAGAAGACCACAGATGATTTAAATTTGAGCACCTCTGAGGCTCT
GCGGATTGACCCCGTTTCTAACACGCACCCACTTCTGGTCTTTGTCAACCCCAAGAGTGG
CGGGAAGCAAGGGGAGAGGGTGCTTTGGAAATTCCAGTATCTACTAAACCCTCGACAAGT
GTTCAACCTCCTCAAGGACGGTCC

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               62-184, gnl|bosTau2|chr5 (33660894-33660772)
               

               
               62-184, gnl|Hg17|chr12 (54620365-54620487)
               

               
               62-184, gnl|Mm7|chr10 (128232955-128232833)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               62-184, gnl|bosTau2|chr5 (33660894-33660772)
               

               
               62-184, gnl|Hg17|chr12 (54620365-54620487)
               

               
               62-184, gnl|Mm7|chr10 (128232955-128232833)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               cly (0.241284)
               

               
               nco (0.161734)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cly (0.241284)
               

               
               nco (0.161734)

	62-184, gnl\|bosTau2\|chr5 (33660894-33660772)
	62-184, gnl\|Hg17\|chr12 (54620365-54620487)
	62-184, gnl\|Mm7\|chr10 (128232955-128232833)