Non-Coding RNA Search

Ss1.1-rcly37b_o15.5

Sequence:


               
               TTGGGAAGCTTCACTCCCTTGGGGGTTTTTGTGTGCCCTCTTGGTTTTTTTTTTTTTGTT
TGTTTGTTTTTGTTTTTTGGCTTTTTTTTTTTTTTGGTTCTTTCAGTCCTTCTATGGAAT
TTTCTCTGAAGTCAATCATTCTGAAATGTTCTTCCCTTCAGTTCATCTATCAGCATCCTA
CCCATCCTTCAAGGCCCAGCATAGATGCCACCTCCTCCATGAAGCCTTTCCCCACCGCCC
CCACCCCCACCTCCTACAATATTTCAATGCTTCTGCAATGATGAATGAGATAAAATAGTT
GTAGTCTTTACTCTAGTCCAGCACGCGATCATTTAAAAAATTAATTTGTAGGATTTTTCT
AGCACGCTCCTTCTCCTACCGTGTTCTTCAGTCTGTATAATTTCTGCGGTGCCTTCACCA
CACTGCCTTACGTAATCCGAACCACAATAAAATTCACATTCAATAAACTGACCAGTCTTT
TTTAAAAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTGGGAAGCTTCACTCCCTTGGGGGTTTTTGTGTGCCCTCTTGGTTTTTTTTTTTTTGTT
TGTTTGTTTTTGTTTTTTGGCTTTTTTTTTTTTTTGGTTCTTTCAGTCCTTCTATGGAAT
TTTCTCTGAAGTCAATCATTCTGAAATGTTCTTCCCTTCAGTTCATCTATCAGCATCCTA
CCCATCCTTCAAGGCCCAGCATAGATGCCACCTCCTCCATGAAGCCTTTCCCCACCGCCC
CCACCCCCACCTCCTACAATATTTCAATGCTTCTGCAATGATGAATGAGATAAAATAGTT
GTAGTCTTTACTCTAGTCCAGCACGCGATCATTTAAAAAATTAATTTGTAGGATTTTTCT
AGCACGCTCCTTCTCCTACCGTGTTCTTCAGTCTGTATAATTTCTGCGGTGCCTTCACCA
CACTGCCTTACGTAATCCGAACCACAATAAAATTCACATTCAATAAACTGACCAGTCTTT
TTTAAAAAAAAAAAAAAAAAAAAA

Aligned organism(s): 11 entry(ies)

More info

Aligned organism(s): 11 entry(ies)

Help | Less info


               
               140-479, gnl|bosTau2|chrX (19405393-19405060)
               

               
               140-479, gnl|canFam2|chrX (87419369-87419595)
               

               
               140-479, gnl|echTel1|scaffold_311962 (202492-202276)
               

               
               140-479, gnl|hg17|chrX (110294457-110294659)
               

               
               140-479, gnl|Hg17|chrX (110294800-110294464)
               

               
               140-479, gnl|loxAfr1|scaffold_901 (63553-63343)
               

               
               140-479, gnl|mm7|chrX (138466539-138466762)
               

               
               140-479, gnl|Mm7|chrX (138466898-138466544)
               

               
               140-479, gnl|panTro1|chrX (114033038-114033236)
               

               
               140-479, gnl|rheMac2|chrX (109923127-109923325)
               

               
               140-479, gnl|rn3|chrX (34775860-34775639)

Aligned organism(s): 11 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               140-479, gnl|bosTau2|chrX (19405393-19405060)
               

               
               140-479, gnl|canFam2|chrX (87419369-87419595)
               

               
               140-479, gnl|echTel1|scaffold_311962 (202492-202276)
               

               
               140-479, gnl|hg17|chrX (110294457-110294659)
               

               
               140-479, gnl|Hg17|chrX (110294800-110294464)
               

               
               140-479, gnl|loxAfr1|scaffold_901 (63553-63343)
               

               
               140-479, gnl|mm7|chrX (138466539-138466762)
               

               
               140-479, gnl|Mm7|chrX (138466898-138466544)
               

               
               140-479, gnl|panTro1|chrX (114033038-114033236)
               

               
               140-479, gnl|rheMac2|chrX (109923127-109923325)
               

               
               140-479, gnl|rn3|chrX (34775860-34775639)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               cly (0.120642)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cly (0.120642)

	140-479, gnl\|bosTau2\|chrX (19405393-19405060)
	140-479, gnl\|canFam2\|chrX (87419369-87419595)
	140-479, gnl\|echTel1\|scaffold_311962 (202492-202276)
	140-479, gnl\|hg17\|chrX (110294457-110294659)
	140-479, gnl\|Hg17\|chrX (110294800-110294464)
	140-479, gnl\|loxAfr1\|scaffold_901 (63553-63343)
	140-479, gnl\|mm7\|chrX (138466539-138466762)
	140-479, gnl\|Mm7\|chrX (138466898-138466544)
	140-479, gnl\|panTro1\|chrX (114033038-114033236)
	140-479, gnl\|rheMac2\|chrX (109923127-109923325)
	140-479, gnl\|rn3\|chrX (34775860-34775639)