Non-Coding RNA Search

Ss1.1-rcmu11_i22.5

Sequence:


               
               AACTCCCATACAGTTTTTTTAATACTATTTCACAGTAGTCAGAATTGATGGTAACAAGAA
TAACACCTCTTTATAAGCCCTCTCATATCCTTTTAAAGTTCTTTTATGTCCACATTCTCA
TTTGGTAATGAATTTTGGCAGAGAAGTTATTTTACAGAGATAAGGGTGAGGCCTGGAACA
GTTTCATAACTTGTCCAAGAAGGTCCTGGAACTGAAACTGGAAGCCAGTTTGTTGTCCAA
AAGCCAGAAAGCCAAGTAGCTTAGTTGACAGTAACTATAAACACTCTTTTGTTGGGGAAC
TACTGACATCACTACTTCTCTTTATTCCACAGAGGGTCCATGTGCAGTAGTAAATTTAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AACTCCCATACAGTTTTTTTAATACTATTTCACAGTAGTCAGAATTGATGGTAACAAGAA
TAACACCTCTTTATAAGCCCTCTCATATCCTTTTAAAGTTCTTTTATGTCCACATTCTCA
TTTGGTAATGAATTTTGGCAGAGAAGTTATTTTACAGAGATAAGGGTGAGGCCTGGAACA
GTTTCATAACTTGTCCAAGAAGGTCCTGGAACTGAAACTGGAAGCCAGTTTGTTGTCCAA
AAGCCAGAAAGCCAAGTAGCTTAGTTGACAGTAACTATAAACACTCTTTTGTTGGGGAAC
TACTGACATCACTACTTCTCTTTATTCCACAGAGGGTCCATGTGCAGTAGTAAATTTAAA

Aligned organism(s): 9 entry(ies)

More info

Aligned organism(s): 9 entry(ies)

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               15-360, gnl|bosTau2|chr10 (6293445-6293802)
               

               
               15-360, gnl|canFam2|chr30 (34369470-34369695)
               

               
               15-360, gnl|dasNov1|scaffold_162698 (4127-4360)
               

               
               15-360, gnl|hg17|chr15 (65287322-65287525)
               

               
               15-360, gnl|Hg17|chr15 (65287655-65287324)
               

               
               15-360, gnl|oryCun1|scaffold_204411 (26034-26246)
               

               
               15-360, gnl|panTro1|chr16 (65796762-65796965)
               

               
               15-360, gnl|rheMac2|chr7 (45778859-45779097)
               

               
               15-360, gnl|rn3|chr8 (67830541-67830347)

Aligned organism(s): 9 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               15-360, gnl|bosTau2|chr10 (6293445-6293802)
               

               
               15-360, gnl|canFam2|chr30 (34369470-34369695)
               

               
               15-360, gnl|dasNov1|scaffold_162698 (4127-4360)
               

               
               15-360, gnl|hg17|chr15 (65287322-65287525)
               

               
               15-360, gnl|Hg17|chr15 (65287655-65287324)
               

               
               15-360, gnl|oryCun1|scaffold_204411 (26034-26246)
               

               
               15-360, gnl|panTro1|chr16 (65796762-65796965)
               

               
               15-360, gnl|rheMac2|chr7 (45778859-45779097)
               

               
               15-360, gnl|rn3|chr8 (67830541-67830347)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cmu (0.372787)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cmu (0.372787)

	15-360, gnl\|bosTau2\|chr10 (6293445-6293802)
	15-360, gnl\|canFam2\|chr30 (34369470-34369695)
	15-360, gnl\|dasNov1\|scaffold_162698 (4127-4360)
	15-360, gnl\|hg17\|chr15 (65287322-65287525)
	15-360, gnl\|Hg17\|chr15 (65287655-65287324)
	15-360, gnl\|oryCun1\|scaffold_204411 (26034-26246)
	15-360, gnl\|panTro1\|chr16 (65796762-65796965)
	15-360, gnl\|rheMac2\|chr7 (45778859-45779097)
	15-360, gnl\|rn3\|chr8 (67830541-67830347)