Ss1.1-rcmu21_d2.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TCATTACAGCTTGGAAGCCTTTTGCATGTTACTGTTCTATTGAAGTCACTCAGGCAATAT GGGATGGATATCTACAACAAGCAGATCCATTTTTTATTTATTTCTTGATGTTAATAATCC TTGTTAATGCAAAGTAAGTATCAAGATGGTTAGATTTTTCTTCTCTTCTCAGGATGCTCT GTTAATATTTAACTCAAATTTATGTGATTCTCATTTACAGAGAAGTCATTTTAGCACAGG AATCTGACAGCAAAGAAGAAGTTATTCAGTTCTTGGAAAATACTCCATCCAGTTTGAATC TAGAAGATATAGAAGACCTTTTCTCTCTGGCTCACTATTATTGCAGTAAAACACCAGCTT CATTTAGGAAGGATAATCACCATTTATTTGGTAGTACTTTGTTGGGGATTAAAGATGACG ATGCTGATCTGAGTCAGGCTCTGTGTTTGGCCATCTCTGTGTCAGAGATCCTTCAAGCAA ATCAGCTTCAAGGAGAAGGAGTCCGGTTCTTTGTGGTGGATTGCCGTCCTGCGGAACAGT ATAATGCTGGGCATTTATCAACTGCTTTCCACTTAGATTCAGATCTGGTTAGTATAAATG CTGATTAAAATT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TCATTACAGCTTGGAAGCCTTTTGCATGTTACTGTTCTATTGAAGTCACTCAGGCAATAT GGGATGGATATCTACAACAAGCAGATCCATTTTTTATTTATTTCTTGATGTTAATAATCC TTGTTAATGCAAAGTAAGTATCAAGATGGTTAGATTTTTCTTCTCTTCTCAGGATGCTCT GTTAATATTTAACTCAAATTTATGTGATTCTCATTTACAGAGAAGTCATTTTAGCACAGG AATCTGACAGCAAAGAAGAAGTTATTCAGTTCTTGGAAAATACTCCATCCAGTTTGAATC TAGAAGATATAGAAGACCTTTTCTCTCTGGCTCACTATTATTGCAGTAAAACACCAGCTT CATTTAGGAAGGATAATCACCATTTATTTGGTAGTACTTTGTTGGGGATTAAAGATGACG ATGCTGATCTGAGTCAGGCTCTGTGTTTGGCCATCTCTGTGTCAGAGATCCTTCAAGCAA ATCAGCTTCAAGGAGAAGGAGTCCGGTTCTTTGTGGTGGATTGCCGTCCTGCGGAACAGT ATAATGCTGGGCATTTATCAACTGCTTTCCACTTAGATTCAGATCTGGTTAGTATAAATG CTGATTAAAATT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 25 entry(ies) | More info |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
| 3-265, gnl|bosTau2|chr1 (24036223-24036490) | |
| 3-265, gnl|Hg17|chr3 (101496614-101496880) | |
| 3-265, gnl|Mm7|chr16 (57056454-57056190) | |
| 370-493, gnl|bosTau2|chr1 (24038763-24038886) | |
| 370-493, gnl|Hg17|chr3 (101499455-101499578) | |
| 370-493, gnl|Mm7|chr16 (57050194-57050071) | |
| 495-610, gnl|bosTau2|chr1 (24040172-24040286) | |
| 495-610, gnl|canFam2|chr33 (9886175-9886314) | |
| 495-610, gnl|danRer3|chr6 (12060924-12061054) | |
| 495-610, gnl|dasNov1|scaffold_130727 (278-414) | |
| 495-610, gnl|echTel1|scaffold_305380 (6763-6906) | |
| 495-610, gnl|fr1|chrUn (42230693-42230557) | |
| 495-610, gnl|galGal2|chr1 (78922656-78922796) | |
| 495-610, gnl|hg17|chr3 (101500746-101500885) | |
| 495-610, gnl|Hg17|chr3 (101500773-101500889) | |
| 495-610, gnl|loxAfr1|scaffold_18426 (27887-28026) | |
| 495-610, gnl|mm7|chr16 (57049056-57048917) | |
| 495-610, gnl|Mm7|chr16 (57049027-57048913) | |
| 495-610, gnl|monDom2|scaffold_50 (10422902-10422763) | |
| 495-610, gnl|oryCun1|scaffold_182839 (2957-3092) | |
| 495-610, gnl|panTro1|chr2 (102735533-102735672) | |
| 495-610, gnl|rheMac2|chr2 (20507982-20508121) | |
| 495-610, gnl|rn3|chr11 (44321451-44321588) | |
| 495-610, gnl|tetNig1|chr1_random (1283510-1283391) | |
| 495-610, gnl|xenTro1|scaffold_116 (1815811-1815943) |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 3-265, gnl|bosTau2|chr1 (24036223-24036490) | |
| 3-265, gnl|Hg17|chr3 (101496614-101496880) | |
| 3-265, gnl|Mm7|chr16 (57056454-57056190) | |
| 370-493, gnl|bosTau2|chr1 (24038763-24038886) | |
| 370-493, gnl|Hg17|chr3 (101499455-101499578) | |
| 370-493, gnl|Mm7|chr16 (57050194-57050071) | |
| 495-610, gnl|bosTau2|chr1 (24040172-24040286) | |
| 495-610, gnl|canFam2|chr33 (9886175-9886314) | |
| 495-610, gnl|danRer3|chr6 (12060924-12061054) | |
| 495-610, gnl|dasNov1|scaffold_130727 (278-414) | |
| 495-610, gnl|echTel1|scaffold_305380 (6763-6906) | |
| 495-610, gnl|fr1|chrUn (42230693-42230557) | |
| 495-610, gnl|galGal2|chr1 (78922656-78922796) | |
| 495-610, gnl|hg17|chr3 (101500746-101500885) | |
| 495-610, gnl|Hg17|chr3 (101500773-101500889) | |
| 495-610, gnl|loxAfr1|scaffold_18426 (27887-28026) | |
| 495-610, gnl|mm7|chr16 (57049056-57048917) | |
| 495-610, gnl|Mm7|chr16 (57049027-57048913) | |
| 495-610, gnl|monDom2|scaffold_50 (10422902-10422763) | |
| 495-610, gnl|oryCun1|scaffold_182839 (2957-3092) | |
| 495-610, gnl|panTro1|chr2 (102735533-102735672) | |
| 495-610, gnl|rheMac2|chr2 (20507982-20508121) | |
| 495-610, gnl|rn3|chr11 (44321451-44321588) | |
| 495-610, gnl|tetNig1|chr1_random (1283510-1283391) | |
| 495-610, gnl|xenTro1|scaffold_116 (1815811-1815943) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cmu (0.186393) |