Non-Coding RNA Search

Ss1.1-rcmu23_o12.5

Sequence:


               
               ATGTACTCCAATGTTCATTGCAGCACCATTTGCAATAGCCAAGACATGGAAACAGCCTAA
ATGTCCATTGACAGAGGAGTAGATAAAGAAGATGTGGTACATATACACAATGGAATATTA
CTCAGCCATTAAAAGGAAAGAAATAACAGCATTTTTAGCAACATGGATGGACCTAGAAAT
ATGCTAAGTGAAGTCAGTCAGACAATGAGATACCAACATCAAATGCTATCACTGACATGT
GGAATCTGAAAAAAGGACACAATGAACTTCTCTGCAGAACAGATACTGACTCACAAACTT
TGAAAAACTTACTGTTTCCAAAGGAGACAGGTTCGGGGGTAGGGGGATGCACTGGGAGTT
TGGGATGGAAATGATATAAAATTGGGTTGTGATGATCATTGTACAACTATAAATGGAATA
AATTCATTGAGTAAATATAAAATAAAATAAAAAAAAAAAAAAAAAAAAAATAGGAATAGA
AGGGAATTTCCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATGTACTCCAATGTTCATTGCAGCACCATTTGCAATAGCCAAGACATGGAAACAGCCTAA
ATGTCCATTGACAGAGGAGTAGATAAAGAAGATGTGGTACATATACACAATGGAATATTA
CTCAGCCATTAAAAGGAAAGAAATAACAGCATTTTTAGCAACATGGATGGACCTAGAAAT
ATGCTAAGTGAAGTCAGTCAGACAATGAGATACCAACATCAAATGCTATCACTGACATGT
GGAATCTGAAAAAAGGACACAATGAACTTCTCTGCAGAACAGATACTGACTCACAAACTT
TGAAAAACTTACTGTTTCCAAAGGAGACAGGTTCGGGGGTAGGGGGATGCACTGGGAGTT
TGGGATGGAAATGATATAAAATTGGGTTGTGATGATCATTGTACAACTATAAATGGAATA
AATTCATTGAGTAAATATAAAATAAAATAAAAAAAAAAAAAAAAAAAAAATAGGAATAGA
AGGGAATTTCCC

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|56492562|emb|CAI01941.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|56492562|emb|CAI01941.1|

Aligned organism(s): 1 entry(ies)

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Aligned organism(s): 1 entry(ies)

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               1-366, gnl|bosTau2|chr10 (16598301-16598663)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-366, gnl|bosTau2|chr10 (16598301-16598663)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               cmu (0.372787)
               

               
               cbe (0.239234)
               

               
               sug (0.127291)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cmu (0.372787)
               

               
               cbe (0.239234)
               

               
               sug (0.127291)