Ss1.1-rcmu25_d23.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GTCGTGCTGTGGGAGGGCTCCTACCGCCGAAGAGTAGTGACCGAAGATGGACCCACATAT GGAAATTCAGCCATCCTCTGACTTCCAGCCATGACCATCACCACCAATCACCATTTCTTA AGCACCTGCTCTGTGCTGAGCACTGTTCTGAACTTTGAGGGGGGATTCAAAAGAGATAGA AGGCACAGTCCTGTCCCTCAAGCAGCTTGTAATTTAATCTGGGAGCTGAAACCCACTCAA ATGATGCGGCGTAAGAACGGTAACAAGCATTATTTCACTAGAATGGGTACTAGGAAAAAA GTTCATGCATATGTCCGTGTTAAACCCACCGATGACTTTGCTCATGAAATGATCCAATAT GGAGATGACAACCAAACCATTGATATTCACTTAAAAAAAGATACTCGGAGAGGAGTTGTC AATAACCAGCAGACAGACTGGTCATTCAAGCTGGATGGAGTTCTCCATGATGCTTCCCAG GACTTGGTTTATGAAACAGTCGCGAAGGATGTGGTTTCTCAGGCCTTTGATGGCTATAAT GGTAATTGAGTTAATTAACTGTTGTTTTACATAAGAAGCTGCAGAACTCCACCCCCTCAC CCCTCAGGAAGATGAGAGCCTGTTTGATCTCCTGTCCACTCTGCCCTATGTTGGACCCTC AGTCACACCAATGACCATTGTGGAAAATACTCAAGGGGTCTTCATTAAGGGCCTGTCTGT CCATCTCACAAG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GTCGTGCTGTGGGAGGGCTCCTACCGCCGAAGAGTAGTGACCGAAGATGGACCCACATAT GGAAATTCAGCCATCCTCTGACTTCCAGCCATGACCATCACCACCAATCACCATTTCTTA AGCACCTGCTCTGTGCTGAGCACTGTTCTGAACTTTGAGGGGGGATTCAAAAGAGATAGA AGGCACAGTCCTGTCCCTCAAGCAGCTTGTAATTTAATCTGGGAGCTGAAACCCACTCAA ATGATGCGGCGTAAGAACGGTAACAAGCATTATTTCACTAGAATGGGTACTAGGAAAAAA GTTCATGCATATGTCCGTGTTAAACCCACCGATGACTTTGCTCATGAAATGATCCAATAT GGAGATGACAACCAAACCATTGATATTCACTTAAAAAAAGATACTCGGAGAGGAGTTGTC AATAACCAGCAGACAGACTGGTCATTCAAGCTGGATGGAGTTCTCCATGATGCTTCCCAG GACTTGGTTTATGAAACAGTCGCGAAGGATGTGGTTTCTCAGGCCTTTGATGGCTATAAT GGTAATTGAGTTAATTAACTGTTGTTTTACATAAGAAGCTGCAGAACTCCACCCCCTCAC CCCTCAGGAAGATGAGAGCCTGTTTGATCTCCTGTCCACTCTGCCCTATGTTGGACCCTC AGTCACACCAATGACCATTGTGGAAAATACTCAAGGGGTCTTCATTAAGGGCCTGTCTGT CCATCTCACAAG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 32 entry(ies) | More info |
| Aligned organism(s): 32 entry(ies) | Help | Less info |
| 33-280, gnl|bosTau2|chr22 (40155018-40154768) | |
| 33-280, gnl|canFam2|chr20 (44587778-44587372) | |
| 33-280, gnl|echTel1|scaffold_319173 (41698-42125) | |
| 33-280, gnl|hg17|chr3 (47297373-47297784) | |
| 33-280, gnl|Hg17|chr3 (47297691-47297443) | |
| 33-280, gnl|loxAfr1|scaffold_80768 (515-948) | |
| 33-280, gnl|mm7|chr9 (110176006-110175604) | |
| 33-280, gnl|Mm7|chr9 (110175696-110175946) | |
| 33-280, gnl|monDom2|scaffold_5 (81762395-81762856) | |
| 33-280, gnl|oryCun1|scaffold_84716 (10097-10484) | |
| 33-280, gnl|panTro1|chr2 (48758260-48758671) | |
| 33-280, gnl|rheMac2|chr2 (89250471-89250066) | |
| 33-280, gnl|rn3|chr8 (114882120-114881725) | |
| 376-596, gnl|bosTau2|chr22 (40151091-40150870) | |
| 376-596, gnl|Hg17|chr3 (47291984-47291775) | |
| 376-596, gnl|Mm7|chr9 (110182737-110182950) | |
| 614-732, gnl|bosTau2|chr22 (40146650-40146532) | |
| 614-732, gnl|canFam2|chr20 (44598310-44598050) | |
| 614-732, gnl|danRer3|chr7 (29684413-29684143) | |
| 614-732, gnl|dasNov1|scaffold_185501 (627-886) | |
| 614-732, gnl|echTel1|scaffold_319173 (29992-30252) | |
| 614-732, gnl|galGal2|chr2 (3459747-3460009) | |
| 614-732, gnl|hg17|chr3 (47287726-47287986) | |
| 614-732, gnl|Hg17|chr3 (47287883-47287765) | |
| 614-732, gnl|loxAfr1|scaffold_2233 (76701-76961) | |
| 614-732, gnl|mm7|chr9 (110187769-110187512) | |
| 614-732, gnl|Mm7|chr9 (110187610-110187728) | |
| 614-732, gnl|monDom2|scaffold_5 (81748181-81748437) | |
| 614-732, gnl|oryCun1|scaffold_173341 (1354-1614) | |
| 614-732, gnl|panTro1|chr2 (48748653-48748913) | |
| 614-732, gnl|rn3|chr8 (114893007-114892748) | |
| 614-732, gnl|xenTro1|scaffold_298 (350550-350784) |
| Aligned organism(s): 32 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 33-280, gnl|bosTau2|chr22 (40155018-40154768) | |
| 33-280, gnl|canFam2|chr20 (44587778-44587372) | |
| 33-280, gnl|echTel1|scaffold_319173 (41698-42125) | |
| 33-280, gnl|hg17|chr3 (47297373-47297784) | |
| 33-280, gnl|Hg17|chr3 (47297691-47297443) | |
| 33-280, gnl|loxAfr1|scaffold_80768 (515-948) | |
| 33-280, gnl|mm7|chr9 (110176006-110175604) | |
| 33-280, gnl|Mm7|chr9 (110175696-110175946) | |
| 33-280, gnl|monDom2|scaffold_5 (81762395-81762856) | |
| 33-280, gnl|oryCun1|scaffold_84716 (10097-10484) | |
| 33-280, gnl|panTro1|chr2 (48758260-48758671) | |
| 33-280, gnl|rheMac2|chr2 (89250471-89250066) | |
| 33-280, gnl|rn3|chr8 (114882120-114881725) | |
| 376-596, gnl|bosTau2|chr22 (40151091-40150870) | |
| 376-596, gnl|Hg17|chr3 (47291984-47291775) | |
| 376-596, gnl|Mm7|chr9 (110182737-110182950) | |
| 614-732, gnl|bosTau2|chr22 (40146650-40146532) | |
| 614-732, gnl|canFam2|chr20 (44598310-44598050) | |
| 614-732, gnl|danRer3|chr7 (29684413-29684143) | |
| 614-732, gnl|dasNov1|scaffold_185501 (627-886) | |
| 614-732, gnl|echTel1|scaffold_319173 (29992-30252) | |
| 614-732, gnl|galGal2|chr2 (3459747-3460009) | |
| 614-732, gnl|hg17|chr3 (47287726-47287986) | |
| 614-732, gnl|Hg17|chr3 (47287883-47287765) | |
| 614-732, gnl|loxAfr1|scaffold_2233 (76701-76961) | |
| 614-732, gnl|mm7|chr9 (110187769-110187512) | |
| 614-732, gnl|Mm7|chr9 (110187610-110187728) | |
| 614-732, gnl|monDom2|scaffold_5 (81748181-81748437) | |
| 614-732, gnl|oryCun1|scaffold_173341 (1354-1614) | |
| 614-732, gnl|panTro1|chr2 (48748653-48748913) | |
| 614-732, gnl|rn3|chr8 (114893007-114892748) | |
| 614-732, gnl|xenTro1|scaffold_298 (350550-350784) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| fcc (0.197785) | |
| cmu (0.186393) | |
| ebs (0.118301) |