Ss1.1-rcmu26_g3.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TGATAGAATGGCACGACCTAGTGGTCGGTCGGGACACAACACTCGAGGAACTGGTTCTTC ATCCTCTGGAGTTTTAATGGTTGGACCTAACTTTAGAGTTGGAAAAAAAATTGGATGTGG GAATTTTGGAGAACTACGATTAGGGAAAAATTTATATACAAATGAATATGTGGCAATTAA ACTGGAGCCCATGAAATCCAGAGCACCACAGCTACATTTGGAATACAGATTCTACAAGCA ATTAGGATCTGGAGATGGTATACCTCAAGTTTACTATTTTGGCCCTTGTGGTAAATACAA TGCTATGGTGCTGGAACTGCTGGGACCTAGTTTGGAAGATTTGTTTGATTTGTGTGATAG AACATTTTCTCTTAAAACAGTTCTCATGATAGCTATCCAACTGATTTCTCGCATGGAATA TGTGCATTCAAAGAACTTGATATACAGAGATGTAAAACCTGAGAACTTCTTAATAGGACG ACCAGGAAACAAAACCCAGCAAGTCATTCATATTATAGATTTTGGTTTGGCAAAGGAATA TATTGACCCAGAGACAAAGAAACACATACCATACAGAGAACACAAGAGCCTTACAGGAAC AGCTAGATATATGAGCATAAACACACATTTAGGAAAAGAACAAAGTAGAAGAGATGACTT AGAAGCTTTAGGTCATATGTTCATGTATTTTCTGAGAGGCAGTCTTCCTTGGCAAGGTTT AAAGGCAGACACATTAAAAGAGAGGTATCAGAAAATTGGAGATACAAAACGAGCCACACC AATAGAAGTGTTATGTGAAAATTTTCCAGAAGAAATGGCAACATATCTTCGTTATGTAAG AAGGCTAGATTTTTTTGAAAAACCAGACTATGACTACCTAAGAAAGCTTTTTACTGACTT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TGATAGAATGGCACGACCTAGTGGTCGGTCGGGACACAACACTCGAGGAACTGGTTCTTC ATCCTCTGGAGTTTTAATGGTTGGACCTAACTTTAGAGTTGGAAAAAAAATTGGATGTGG GAATTTTGGAGAACTACGATTAGGGAAAAATTTATATACAAATGAATATGTGGCAATTAA ACTGGAGCCCATGAAATCCAGAGCACCACAGCTACATTTGGAATACAGATTCTACAAGCA ATTAGGATCTGGAGATGGTATACCTCAAGTTTACTATTTTGGCCCTTGTGGTAAATACAA TGCTATGGTGCTGGAACTGCTGGGACCTAGTTTGGAAGATTTGTTTGATTTGTGTGATAG AACATTTTCTCTTAAAACAGTTCTCATGATAGCTATCCAACTGATTTCTCGCATGGAATA TGTGCATTCAAAGAACTTGATATACAGAGATGTAAAACCTGAGAACTTCTTAATAGGACG ACCAGGAAACAAAACCCAGCAAGTCATTCATATTATAGATTTTGGTTTGGCAAAGGAATA TATTGACCCAGAGACAAAGAAACACATACCATACAGAGAACACAAGAGCCTTACAGGAAC AGCTAGATATATGAGCATAAACACACATTTAGGAAAAGAACAAAGTAGAAGAGATGACTT AGAAGCTTTAGGTCATATGTTCATGTATTTTCTGAGAGGCAGTCTTCCTTGGCAAGGTTT AAAGGCAGACACATTAAAAGAGAGGTATCAGAAAATTGGAGATACAAAACGAGCCACACC AATAGAAGTGTTATGTGAAAATTTTCCAGAAGAAATGGCAACATATCTTCGTTATGTAAG AAGGCTAGATTTTTTTGAAAAACCAGACTATGACTACCTAAGAAAGCTTTTTACTGACTT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 1-147, gnl|bosTau2|chrX (5989797-5989943) | |
| 1-147, gnl|Hg17|chr5 (122909292-122909438) | |
| 1-147, gnl|Mm7|chr18 (54277434-54277580) | |
| 403-638, gnl|bosTau2|chrX (6021086-6021321) | |
| 403-638, gnl|canFam2|chr11 (16424648-16424886) | |
| 403-638, gnl|danRer3|chr2 (14871229-14871467) | |
| 403-638, gnl|dasNov1|scaffold_225649 (1436-1674) | |
| 403-638, gnl|echTel1|scaffold_320238 (37954-37716) | |
| 403-638, gnl|fr1|chrUn (301467357-301467119) | |
| 403-638, gnl|galGal2|chr10 (1383673-1383435) | |
| 403-638, gnl|hg17|chr5 (122939321-122939559) | |
| 403-638, gnl|Hg17|chr5 (122939321-122939556) | |
| 403-638, gnl|loxAfr1|scaffold_584 (37228-36990) | |
| 403-638, gnl|mm7|chr18 (54300420-54300658) | |
| 403-638, gnl|Mm7|chr18 (54300420-54300655) | |
| 403-638, gnl|monDom2|scaffold_12 (49282264-49282502) | |
| 403-638, gnl|oryCun1|scaffold_145681 (15269-15031) | |
| 403-638, gnl|panTro1|chr4 (129225153-129225391) | |
| 403-638, gnl|rheMac2|chr6 (119966952-119967190) | |
| 403-638, gnl|rn3|chr18 (49450888-49451126) | |
| 403-638, gnl|tetNig1|chrUn_random (40556737-40556975) | |
| 403-638, gnl|xenTro1|scaffold_2 (4287145-4286907) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-147, gnl|bosTau2|chrX (5989797-5989943) | |
| 1-147, gnl|Hg17|chr5 (122909292-122909438) | |
| 1-147, gnl|Mm7|chr18 (54277434-54277580) | |
| 403-638, gnl|bosTau2|chrX (6021086-6021321) | |
| 403-638, gnl|canFam2|chr11 (16424648-16424886) | |
| 403-638, gnl|danRer3|chr2 (14871229-14871467) | |
| 403-638, gnl|dasNov1|scaffold_225649 (1436-1674) | |
| 403-638, gnl|echTel1|scaffold_320238 (37954-37716) | |
| 403-638, gnl|fr1|chrUn (301467357-301467119) | |
| 403-638, gnl|galGal2|chr10 (1383673-1383435) | |
| 403-638, gnl|hg17|chr5 (122939321-122939559) | |
| 403-638, gnl|Hg17|chr5 (122939321-122939556) | |
| 403-638, gnl|loxAfr1|scaffold_584 (37228-36990) | |
| 403-638, gnl|mm7|chr18 (54300420-54300658) | |
| 403-638, gnl|Mm7|chr18 (54300420-54300655) | |
| 403-638, gnl|monDom2|scaffold_12 (49282264-49282502) | |
| 403-638, gnl|oryCun1|scaffold_145681 (15269-15031) | |
| 403-638, gnl|panTro1|chr4 (129225153-129225391) | |
| 403-638, gnl|rheMac2|chr6 (119966952-119967190) | |
| 403-638, gnl|rn3|chr18 (49450888-49451126) | |
| 403-638, gnl|tetNig1|chrUn_random (40556737-40556975) | |
| 403-638, gnl|xenTro1|scaffold_2 (4287145-4286907) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cmu (0.186393) | |
| sin (0.174948) |