Non-Coding RNA Search

Ss1.1-rcmu28_p15.5

Sequence:


               
               TTTTTTTTTTTTTTTTTTTCTAAATTAAGTTTTTTAATAGAAAAAATAATTTCACCCATG
GCAGAGATTTAAGGAAAAATTCTGTCATTCCCGTTGTCGTTGTGGCATTATCGCCCCTCT
CCCATGGGCTGGGTTGATACTGTGAAATAAACTAAAAAGTAAATAACATTTTCATGCCCC
CCCGCCCCACACCATCACGGAAAAAGAAAGCAGCCTTTCGGTGAGCCCCTGGCCCCAGCG
GAACTAGTGTGTCACCTGTAAAGACACAGATGAGAGAGCTTCCTGCCCAGGGAACTGCTG
GTCTCAGGTACCCTTCTCCAGAGCCGTGCTTCCAGCTAAGTCCCCCCGGAAAAGCTGACC
TGGACCGCGTACAGGTGCCCCAGGGCATTTCGCGCGGTTGCCATGGAAGAAATTTCCAGA
TGGGCTCCTCCGATCCTAATTCTTAGGGACCAAAGGTGTTTTTAACAAGATGATCTTTAT
ATTTGATTTTTTTATCGAGAAAGGAGATGGTGGCTCTACCTTGTAGCGTCAACTTTTAAA
TTATAGCTATTCAGCATGAATTGACCACGGCTGTAAGTTGTAAAATGTTTTCATATTAAG
AATGTAATTATTTCCTTATTGTATTTTTTAGAAACGAAAGTCATATTTAAAATTCTCTTT
GAAAGAAACAGGCAAGAAACAGGAAAGATTTTTTTTAAGGAAATATGTTGGCAGGGCCCG
TTTTAAAAGAACTGTAAATATATTTTCACTGTGTTCCTCGATGTATTTAATCCATAAAGT
AAGAAAATTTTATCCGAAGAAACTCACATTGGCAATACGAGTTTTCAGTCCATTTGCCCG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTTTTTTTTTTTTTTTTTCTAAATTAAGTTTTTTAATAGAAAAAATAATTTCACCCATG
GCAGAGATTTAAGGAAAAATTCTGTCATTCCCGTTGTCGTTGTGGCATTATCGCCCCTCT
CCCATGGGCTGGGTTGATACTGTGAAATAAACTAAAAAGTAAATAACATTTTCATGCCCC
CCCGCCCCACACCATCACGGAAAAAGAAAGCAGCCTTTCGGTGAGCCCCTGGCCCCAGCG
GAACTAGTGTGTCACCTGTAAAGACACAGATGAGAGAGCTTCCTGCCCAGGGAACTGCTG
GTCTCAGGTACCCTTCTCCAGAGCCGTGCTTCCAGCTAAGTCCCCCCGGAAAAGCTGACC
TGGACCGCGTACAGGTGCCCCAGGGCATTTCGCGCGGTTGCCATGGAAGAAATTTCCAGA
TGGGCTCCTCCGATCCTAATTCTTAGGGACCAAAGGTGTTTTTAACAAGATGATCTTTAT
ATTTGATTTTTTTATCGAGAAAGGAGATGGTGGCTCTACCTTGTAGCGTCAACTTTTAAA
TTATAGCTATTCAGCATGAATTGACCACGGCTGTAAGTTGTAAAATGTTTTCATATTAAG
AATGTAATTATTTCCTTATTGTATTTTTTAGAAACGAAAGTCATATTTAAAATTCTCTTT
GAAAGAAACAGGCAAGAAACAGGAAAGATTTTTTTTAAGGAAATATGTTGGCAGGGCCCG
TTTTAAAAGAACTGTAAATATATTTTCACTGTGTTCCTCGATGTATTTAATCCATAAAGT
AAGAAAATTTTATCCGAAGAAACTCACATTGGCAATACGAGTTTTCAGTCCATTTGCCCG

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

Help | Less info


               
               190-840, gnl|bosTau2|chr6 (68759844-68759198)
               

               
               190-840, gnl|Hg17|chr4 (7879268-7878637)

Aligned organism(s): 2 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               190-840, gnl|bosTau2|chr6 (68759844-68759198)
               

               
               190-840, gnl|Hg17|chr4 (7879268-7878637)

Expressed library(ies): 3 entry(ies)

More info

Expressed library(ies): 3 entry(ies)

Help | Less info


               
               cmu (0.372787)
               

               
               cte (0.29274)
               

               
               cly (0.120642)

Expressed library(ies): 3 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cmu (0.372787)
               

               
               cte (0.29274)
               

               
               cly (0.120642)

	190-840, gnl\|bosTau2\|chr6 (68759844-68759198)
	190-840, gnl\|Hg17\|chr4 (7879268-7878637)