Non-Coding RNA Search

Ss1.1-rcmu35_e20.5

Sequence:


               
               CTAGTCGGATTCGTTTCCGCTGTGCCATGATGGGAACTCCAAGGAAAGCATTTCTGAAGA
GACCTNTACAACACCAGGAAAACATCCCGTGGTCCCTTGCGCTCTAGTTATTTGTGCAGT
GTGACTGCAGAAGCCCTCATGTGGAGAGTCCGGCAGTGTCCTCACTAAGGCGGCCTGAGA
ATCTAAAAGATGGCCTTGGTNATCGTCTTCTGTTCTTAGCCCCTTGCTGCTAGACTCAAT
TATTGGATATTTGCCAGAAGGAGGAAACATCTTCCTTTCATCTGTGCCGACTTATCACTT
AGGCATAAAAACAGTACAACTTCTCACCAACAATAAAATACAGCAATAAAATATTTTATA
TTTGAAGGCACTCAGTTTTGCCACCTGCTTATTCTTTTTTCCAAAGTGTAATTTGGATGA
GTTCCCTGGTGGCTCAGTGGGTTAAGGATATGACGTTGTCACTGCTGTGGCTTGGGTTGC
TGCTGTGGTGAGGGTTTGATCCCTGGTCCCAGAACTTCCACATGTTGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTAGTCGGATTCGTTTCCGCTGTGCCATGATGGGAACTCCAAGGAAAGCATTTCTGAAGA
GACCTNTACAACACCAGGAAAACATCCCGTGGTCCCTTGCGCTCTAGTTATTTGTGCAGT
GTGACTGCAGAAGCCCTCATGTGGAGAGTCCGGCAGTGTCCTCACTAAGGCGGCCTGAGA
ATCTAAAAGATGGCCTTGGTNATCGTCTTCTGTTCTTAGCCCCTTGCTGCTAGACTCAAT
TATTGGATATTTGCCAGAAGGAGGAAACATCTTCCTTTCATCTGTGCCGACTTATCACTT
AGGCATAAAAACAGTACAACTTCTCACCAACAATAAAATACAGCAATAAAATATTTTATA
TTTGAAGGCACTCAGTTTTGCCACCTGCTTATTCTTTTTTCCAAAGTGTAATTTGGATGA
GTTCCCTGGTGGCTCAGTGGGTTAAGGATATGACGTTGTCACTGCTGTGGCTTGGGTTGC
TGCTGTGGTGAGGGTTTGATCCCTGGTCCCAGAACTTCCACATGTTGC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               164-416, gnl|bosTau2|chrX (1307016-1306763)
               

               
               164-416, gnl|Hg17|chrX (118543072-118542790)
               

               
               164-416, gnl|Mm7|chrX (31681379-31681152)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               164-416, gnl|bosTau2|chrX (1307016-1306763)
               

               
               164-416, gnl|Hg17|chrX (118543072-118542790)
               

               
               164-416, gnl|Mm7|chrX (31681379-31681152)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cmu (0.186393)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cmu (0.186393)

	164-416, gnl\|bosTau2\|chrX (1307016-1306763)
	164-416, gnl\|Hg17\|chrX (118543072-118542790)
	164-416, gnl\|Mm7\|chrX (31681379-31681152)