Non-Coding RNA Search

Ss1.1-rcmu35_j5.5

Sequence:


               
               TCACGCTCACTTAGGCAATGCTGCACTTCTCCTTATCACTGGTTATCGGAAAATGTGCCT
TCATTTTCAGAATAGTGGTGTGTGCATTTCTGAGTATGTAGCAAACCCTTTGATATTTGA
ATTAGATACTAAAAACATTTGGGTGTTGAGGTTTTGCACTCGTAGATACCATTTAAAAGC
ATGGACTTGGTAATTTAATTAGAAGTTTTCTATACTGTACACCTTGTTACATTTCTGTGA
AAGGCTCTTTACCAGTGCAGAATAACTGTGGGTCAAGGGGGGAGAGAAACAACTGTTCTC
TAAATAGTCTGATGTTACATGACTGTCAATGTGAGTCTGTGGGCAATAAAGAATATTGTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCACGCTCACTTAGGCAATGCTGCACTTCTCCTTATCACTGGTTATCGGAAAATGTGCCT
TCATTTTCAGAATAGTGGTGTGTGCATTTCTGAGTATGTAGCAAACCCTTTGATATTTGA
ATTAGATACTAAAAACATTTGGGTGTTGAGGTTTTGCACTCGTAGATACCATTTAAAAGC
ATGGACTTGGTAATTTAATTAGAAGTTTTCTATACTGTACACCTTGTTACATTTCTGTGA
AAGGCTCTTTACCAGTGCAGAATAACTGTGGGTCAAGGGGGGAGAGAAACAACTGTTCTC
TAAATAGTCTGATGTTACATGACTGTCAATGTGAGTCTGTGGGCAATAAAGAATATTGTG

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               1-360, gnl|bosTau2|chr8 (48825413-48825052)
               

               
               1-360, gnl|Hg17|chr9 (88850605-88850247)
               

               
               1-360, gnl|Mm7|chr13 (50456706-50456302)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-360, gnl|bosTau2|chr8 (48825413-48825052)
               

               
               1-360, gnl|Hg17|chr9 (88850605-88850247)
               

               
               1-360, gnl|Mm7|chr13 (50456706-50456302)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               fco (0.314416)
               

               
               cmu (0.186393)
               

               
               bla (0.124347)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fco (0.314416)
               

               
               cmu (0.186393)
               

               
               bla (0.124347)

	1-360, gnl\|bosTau2\|chr8 (48825413-48825052)
	1-360, gnl\|Hg17\|chr9 (88850605-88850247)
	1-360, gnl\|Mm7\|chr13 (50456706-50456302)