Ss1.1-rcmu36_i19.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CACTTCAGTCAACGCTGGTCAGTCCCCAGAGAAAGGTGCCCAGCAAAGACAAAAGCGATT TCATTCTGCTTCGCAGAGATCGTCATCTTTACCACCATCAAATCGTAAATCATGTGCTCC AACAAAAAGAGAGATTATGTTAACACCAGTGACTGTGGCTTATAGTCCAAAGCGATCCCC TAAAGAAAATTTGTCCCCAGGATTTAGTCATCTGCTTAGCAAAAATGAAAGCAGTCCGAT TCGATTTGATATACTTTTGGATGATTTAGATACTGTTCCTGTGTCTACATTACAACGTAC CAATCCAAGGAAACAACTCCAGTTTCTTCCTCTAGATGACTTGGAAGAAAAAAAATACTC AGAAAAAGCCACTGACATCCATGTTGATCATAGCTCTTCCCCCGAACCATTGCCAAATGG GGTGAAGAAAGTCTCTGTGAGGCCAGCTTGGGAGAAGAGTAAACCGCTTAGCCATGAACC TGGGCAGTCCACTTCAGCCACGTCACAGGGTAATGACTTTGAGTACACGGCAAAAATTAG GACTCTAGCTGAAACGGAACGTTTTTTTGACGAACTTACAAAAGAAAAAGACCAGATTGA GGCAGCTCTAAGTCGAATGCCTTCTACTGGAGGACGAACCACTTTGCAGACAAGATTAAA CCAGGAAGCCTTGGAAGATCGTTTGGAGAAGATTAATCGAGAGCTGGGTTCAGTTCGCAT GACATTAAAGAAATTTCATGTTTT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CACTTCAGTCAACGCTGGTCAGTCCCCAGAGAAAGGTGCCCAGCAAAGACAAAAGCGATT TCATTCTGCTTCGCAGAGATCGTCATCTTTACCACCATCAAATCGTAAATCATGTGCTCC AACAAAAAGAGAGATTATGTTAACACCAGTGACTGTGGCTTATAGTCCAAAGCGATCCCC TAAAGAAAATTTGTCCCCAGGATTTAGTCATCTGCTTAGCAAAAATGAAAGCAGTCCGAT TCGATTTGATATACTTTTGGATGATTTAGATACTGTTCCTGTGTCTACATTACAACGTAC CAATCCAAGGAAACAACTCCAGTTTCTTCCTCTAGATGACTTGGAAGAAAAAAAATACTC AGAAAAAGCCACTGACATCCATGTTGATCATAGCTCTTCCCCCGAACCATTGCCAAATGG GGTGAAGAAAGTCTCTGTGAGGCCAGCTTGGGAGAAGAGTAAACCGCTTAGCCATGAACC TGGGCAGTCCACTTCAGCCACGTCACAGGGTAATGACTTTGAGTACACGGCAAAAATTAG GACTCTAGCTGAAACGGAACGTTTTTTTGACGAACTTACAAAAGAAAAAGACCAGATTGA GGCAGCTCTAAGTCGAATGCCTTCTACTGGAGGACGAACCACTTTGCAGACAAGATTAAA CCAGGAAGCCTTGGAAGATCGTTTGGAGAAGATTAATCGAGAGCTGGGTTCAGTTCGCAT GACATTAAAGAAATTTCATGTTTT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
| 3-122, gnl|bosTau2|chr17 (26273030-26272911) | |
| 3-122, gnl|canFam2|chr26 (9385315-9385170) | |
| 3-122, gnl|dasNov1|scaffold_45395 (8594-8446) | |
| 3-122, gnl|echTel1|scaffold_317122 (142598-142450) | |
| 3-122, gnl|galGal2|chr15 (5041370-5041215) | |
| 3-122, gnl|hg17|chr12 (122173369-122173517) | |
| 3-122, gnl|Hg17|chr12 (122173496-122173377) | |
| 3-122, gnl|loxAfr1|scaffold_5425 (30433-30581) | |
| 3-122, gnl|mm7|chr5 (123508746-123508892) | |
| 3-122, gnl|Mm7|chr5 (123508871-123508752) | |
| 3-122, gnl|monDom2|scaffold_97 (3701190-3701356) | |
| 3-122, gnl|oryCun1|scaffold_108579 (2645-2787) | |
| 3-122, gnl|panTro1|chr10 (125252417-125252565) | |
| 3-122, gnl|rheMac2|chr11 (124435502-124435650) | |
| 3-122, gnl|rn3|chr12 (33312475-33312329) | |
| 123-243, gnl|bosTau2|chr17 (26272108-26271988) | |
| 123-243, gnl|Hg17|chr12 (122172561-122172441) | |
| 123-243, gnl|Mm7|chr5 (123507905-123507785) | |
| 342-595, gnl|bosTau2|chr17 (26270406-26270153) | |
| 342-595, gnl|Hg17|chr12 (122170816-122170563) | |
| 342-595, gnl|Mm7|chr5 (123506084-123505831) |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 3-122, gnl|bosTau2|chr17 (26273030-26272911) | |
| 3-122, gnl|canFam2|chr26 (9385315-9385170) | |
| 3-122, gnl|dasNov1|scaffold_45395 (8594-8446) | |
| 3-122, gnl|echTel1|scaffold_317122 (142598-142450) | |
| 3-122, gnl|galGal2|chr15 (5041370-5041215) | |
| 3-122, gnl|hg17|chr12 (122173369-122173517) | |
| 3-122, gnl|Hg17|chr12 (122173496-122173377) | |
| 3-122, gnl|loxAfr1|scaffold_5425 (30433-30581) | |
| 3-122, gnl|mm7|chr5 (123508746-123508892) | |
| 3-122, gnl|Mm7|chr5 (123508871-123508752) | |
| 3-122, gnl|monDom2|scaffold_97 (3701190-3701356) | |
| 3-122, gnl|oryCun1|scaffold_108579 (2645-2787) | |
| 3-122, gnl|panTro1|chr10 (125252417-125252565) | |
| 3-122, gnl|rheMac2|chr11 (124435502-124435650) | |
| 3-122, gnl|rn3|chr12 (33312475-33312329) | |
| 123-243, gnl|bosTau2|chr17 (26272108-26271988) | |
| 123-243, gnl|Hg17|chr12 (122172561-122172441) | |
| 123-243, gnl|Mm7|chr5 (123507905-123507785) | |
| 342-595, gnl|bosTau2|chr17 (26270406-26270153) | |
| 342-595, gnl|Hg17|chr12 (122170816-122170563) | |
| 342-595, gnl|Mm7|chr5 (123506084-123505831) |
| Expressed library(ies): 4 entry(ies) | More info |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
| cte (0.29274) | |
| cmu (0.186393) | |
| spl (0.143184) | |
| ova (0.129132) |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cte (0.29274) | |
| cmu (0.186393) | |
| spl (0.143184) | |
| ova (0.129132) |