Ss1.1-rcmu40_j3.5
|
GTTGGCCTATCCCAACCCCATAGATCCTCTCAATGGTGATGCTGCAGCTATGTACCTCCA
TCGACCAGAAGAATACAAGCAGAAAATTAAAGAGTACATCCAGAAATATGCAACGGAGGA
GGCACTGAAAGAGCAGGAAGAAGGCACCGGAGACAGCTCATCGGAGAGCTCTATGTCTGA
CTTTTCGGAAGATGAGGCCCAGGATATGGAGTTGTAGTAGAAAAAGCACCTGCTTTTCAG
AAAGACTATTATTTCCTAACCATGAGAAGCAGACTATAATATTCATATTTAAACAAAGCA
ATTTTTTTTATTACTAAACAAGGTTTTTATGAATAATAGCATTGATATATATATATTATA |
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GTTGGCCTATCCCAACCCCATAGATCCTCTCAATGGTGATGCTGCAGCTATGTACCTCCA
TCGACCAGAAGAATACAAGCAGAAAATTAAAGAGTACATCCAGAAATATGCAACGGAGGA
GGCACTGAAAGAGCAGGAAGAAGGCACCGGAGACAGCTCATCGGAGAGCTCTATGTCTGA
CTTTTCGGAAGATGAGGCCCAGGATATGGAGTTGTAGTAGAAAAAGCACCTGCTTTTCAG
AAAGACTATTATTTCCTAACCATGAGAAGCAGACTATAATATTCATATTTAAACAAAGCA
ATTTTTTTTATTACTAAACAAGGTTTTTATGAATAATAGCATTGATATATATATATTATA |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
91-360, gnl|bosTau2|chr4 (49238950-49239219) |
|
91-360, gnl|canFam2|chr14 (9969365-9969584) |
|
91-360, gnl|danRer3|chr4 (16995625-16995395) |
|
91-360, gnl|dasNov1|scaffold_41202 (41375-41594) |
|
91-360, gnl|echTel1|scaffold_207266 (1107-887) |
|
91-360, gnl|fr1|chrUn (208759725-208759956) |
|
91-360, gnl|galGal2|chr14 (14743641-14743421) |
|
91-360, gnl|Hg17|chr7 (129068854-129068585) |
|
91-360, gnl|hg17|chr8 (82329897-82330115) |
|
91-360, gnl|loxAfr1|scaffold_162879 (4776-4557) |
|
91-360, gnl|Mm7|chr6 (30147231-30146962) |
|
91-360, gnl|mm7|chr7 (35857990-35858196) |
|
91-360, gnl|monDom2|scaffold_22 (14663106-14663326) |
|
91-360, gnl|oryCun1|scaffold_198450 (35805-35598) |
|
91-360, gnl|panTro1|chr7 (84460526-84460744) |
|
91-360, gnl|rheMac2|chr3 (167202542-167202335) |
|
91-360, gnl|rn3|chr4 (57401075-57400868) |
|
91-360, gnl|tetNig1|chr19 (2988811-2988564) |
|
91-360, gnl|xenTro1|scaffold_20 (2804128-2804353) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
91-360, gnl|bosTau2|chr4 (49238950-49239219) |
|
91-360, gnl|canFam2|chr14 (9969365-9969584) |
|
91-360, gnl|danRer3|chr4 (16995625-16995395) |
|
91-360, gnl|dasNov1|scaffold_41202 (41375-41594) |
|
91-360, gnl|echTel1|scaffold_207266 (1107-887) |
|
91-360, gnl|fr1|chrUn (208759725-208759956) |
|
91-360, gnl|galGal2|chr14 (14743641-14743421) |
|
91-360, gnl|Hg17|chr7 (129068854-129068585) |
|
91-360, gnl|hg17|chr8 (82329897-82330115) |
|
91-360, gnl|loxAfr1|scaffold_162879 (4776-4557) |
|
91-360, gnl|Mm7|chr6 (30147231-30146962) |
|
91-360, gnl|mm7|chr7 (35857990-35858196) |
|
91-360, gnl|monDom2|scaffold_22 (14663106-14663326) |
|
91-360, gnl|oryCun1|scaffold_198450 (35805-35598) |
|
91-360, gnl|panTro1|chr7 (84460526-84460744) |
|
91-360, gnl|rheMac2|chr3 (167202542-167202335) |
|
91-360, gnl|rn3|chr4 (57401075-57400868) |
|
91-360, gnl|tetNig1|chr19 (2988811-2988564) |
|
91-360, gnl|xenTro1|scaffold_20 (2804128-2804353) |
|
cte (0.29274) |
|
cmu (0.186393) |
|
csk (0.140746) |
|
cly (0.120642) |
|
cte (0.29274) |
|
cmu (0.186393) |
|
csk (0.140746) |
|
cly (0.120642) |
