Non-Coding RNA Search

Ss1.1-rcol1001b_n15.5

Sequence:


               
               TGCCTGCTGACCTGTCTCCACAACCGGGGACATGGACGCCCCCACCCGCGCGCCCATCAG
CTTTGCGGCCGTGTCGGCACCAGGCTGTAGCTGGCGTGTTGCTTTATGGACGTCTTTCCC
TTTTTGAAACGAGATTCTCCAAGGGGTCAGGCTGAGACTGTAATAAGCCCAAAGCTGGAA
GCGATCTCTCAAATGTGGTTCTAGCCGCACTCTGCTGGCATCGCCATGCCTTCTGCCACT
GGCATCCACCAACCAGACCGGGCAGACTCCACACTGACTTCCTGAATGTCTTTCAGTGGG
AATGAGCACGGCTCTCCCACAGAGTTAAAATGTCTGTATCCGGTTCAAATGCTGCTGAAT
GCTGTGAATGTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGCCTGCTGACCTGTCTCCACAACCGGGGACATGGACGCCCCCACCCGCGCGCCCATCAG
CTTTGCGGCCGTGTCGGCACCAGGCTGTAGCTGGCGTGTTGCTTTATGGACGTCTTTCCC
TTTTTGAAACGAGATTCTCCAAGGGGTCAGGCTGAGACTGTAATAAGCCCAAAGCTGGAA
GCGATCTCTCAAATGTGGTTCTAGCCGCACTCTGCTGGCATCGCCATGCCTTCTGCCACT
GGCATCCACCAACCAGACCGGGCAGACTCCACACTGACTTCCTGAATGTCTTTCAGTGGG
AATGAGCACGGCTCTCCCACAGAGTTAAAATGTCTGTATCCGGTTCAAATGCTGCTGAAT
GCTGTGAATGTT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-364, gnl|bosTau2|chr12 (11005243-11005605)
               

               
               1-364, gnl|Hg17|chr13 (51238443-51238815)
               

               
               1-364, gnl|Mm7|chr14 (57824861-57825269)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-364, gnl|bosTau2|chr12 (11005243-11005605)
               

               
               1-364, gnl|Hg17|chr13 (51238443-51238815)
               

               
               1-364, gnl|Mm7|chr14 (57824861-57825269)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               col (0.195008)
               

               
               nco (0.161734)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               col (0.195008)
               

               
               nco (0.161734)

	1-364, gnl\|bosTau2\|chr12 (11005243-11005605)
	1-364, gnl\|Hg17\|chr13 (51238443-51238815)
	1-364, gnl\|Mm7\|chr14 (57824861-57825269)