Ss1.1-rcol1003b_a22.5
Sequence: | Distiller database | More info |
Sequence: | Distiller database | Help | Less info |
TCCAACCCCCCTCCCCTCCTGTGTCCCTTGTAAATAGAACCAGACCAGCCCCTCTCCTCC TCTTCCCTTCCTTGGCCCCCGGGTGTAAATAGATTGTTATAATTTTTTTCTTAAAGAAAA CGTCGATTCGCACCGTCCAACCTGGCCCCTTCCCCTCCTACAGCTGTGTCCCTGCTCCTG CCCTCTGCCCCTAAGGCCTCCTCCCTTCCCCCCACCCTGGAGGGCAGGGGCAGTGGGGGA GCTCCTGATGTCTTAGTTTTCACAGTAAGGTTTGCCTGTGTACAGACCTCCGTTCAATAA ATTATTGGCATG |
Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
TCCAACCCCCCTCCCCTCCTGTGTCCCTTGTAAATAGAACCAGACCAGCCCCTCTCCTCC TCTTCCCTTCCTTGGCCCCCGGGTGTAAATAGATTGTTATAATTTTTTTCTTAAAGAAAA CGTCGATTCGCACCGTCCAACCTGGCCCCTTCCCCTCCTACAGCTGTGTCCCTGCTCCTG CCCTCTGCCCCTAAGGCCTCCTCCCTTCCCCCCACCCTGGAGGGCAGGGGCAGTGGGGGA GCTCCTGATGTCTTAGTTTTCACAGTAAGGTTTGCCTGTGTACAGACCTCCGTTCAATAA ATTATTGGCATG |
Predicted RNA structure(s): 1 entry(ies) | More info |
Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
160-312, + strand, RNAz p=0.72858 |
Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
160-312, + strand, RNAz p=0.72858 |
Homologous human UTR: 1 entry(ies) | More info |
Homologous human UTR: 1 entry(ies) | Help | Less info |
Human gene identifier and UTR site,
human gene reading direction
human gene reading direction
5' of NM_019884, + |
Aligned organism(s): 3 entry(ies) | More info |
Aligned organism(s): 3 entry(ies) | Help | Less info |
1-312, gnl|bosTau2|chr18 (44947991-44947679) | |
1-312, gnl|Hg17|chr19 (47426496-47426186) | |
1-312, gnl|Mm7|chr7 (22017580-22017307) |
Aligned organism(s): 3 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
1-312, gnl|bosTau2|chr18 (44947991-44947679) | |
1-312, gnl|Hg17|chr19 (47426496-47426186) | |
1-312, gnl|Mm7|chr7 (22017580-22017307) |
Expressed library(ies): 8 entry(ies) | More info |
Expressed library(ies): 8 entry(ies) | Help | Less info |
elu (0.385356) | |
col (0.195008) | |
ton (0.1755) | |
hyp (0.142837) | |
hlv (0.139256) | |
ute (0.132784) | |
ebs (0.118301) | |
ecc (0.115035) |
Expressed library(ies): 8 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
elu (0.385356) | |
col (0.195008) | |
ton (0.1755) | |
hyp (0.142837) | |
hlv (0.139256) | |
ute (0.132784) | |
ebs (0.118301) | |
ecc (0.115035) |