Non-Coding RNA Search

Ss1.1-rcol1006b_e24.5

Sequence:


               
               AACAGTTCCTGCCCCCCGAAGCCTTCATCCACATCAACGACTTCCAGAGCCCCAAGGAAC
TGGCCCAGTATCTGCTGGCACTGGACAAGGACGACGCCCGCTATCTGGGCTACTTCCGCT
GGCGGGAGACCCTGCGGCCTCAATTCTTCAGCTGGGCCTTGATGTTCTGTAAGGCCTGCT
GGCGGCTGCAGCAGGAGCCCAGCTACCAGACAGTGCCCAGCATCGCGTCTTGGTTCACAT
AAGCCAGGCAACCTGGGGCCTGGGCTGCCGGGAGCCTGGGGGCATAGGTGGCTGGAGCTT
TTGCTTACCGGTGGCTTCTCCTGCCAGGCGCCTCTGATGCCAGAAATCTTGCCTCCCTGG
GAAATGGCTTTTGAGGAGCTCCCTCTGATGGACGGCTACCTGCCAGGGGCCATGACTGCT
GGGGACCTCCCCAGCTAGGTCACTCACCCCCTGGGGAACTGGCCTTGGTGTCCTTAGTGA
TGGTGCTGATGGATTTGCATGTGATTACTGTGGCTGTTGTTAATTAACCGCCTCTGGGCT
AAGCAGGTGGCAATATGACACTAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AACAGTTCCTGCCCCCCGAAGCCTTCATCCACATCAACGACTTCCAGAGCCCCAAGGAAC
TGGCCCAGTATCTGCTGGCACTGGACAAGGACGACGCCCGCTATCTGGGCTACTTCCGCT
GGCGGGAGACCCTGCGGCCTCAATTCTTCAGCTGGGCCTTGATGTTCTGTAAGGCCTGCT
GGCGGCTGCAGCAGGAGCCCAGCTACCAGACAGTGCCCAGCATCGCGTCTTGGTTCACAT
AAGCCAGGCAACCTGGGGCCTGGGCTGCCGGGAGCCTGGGGGCATAGGTGGCTGGAGCTT
TTGCTTACCGGTGGCTTCTCCTGCCAGGCGCCTCTGATGCCAGAAATCTTGCCTCCCTGG
GAAATGGCTTTTGAGGAGCTCCCTCTGATGGACGGCTACCTGCCAGGGGCCATGACTGCT
GGGGACCTCCCCAGCTAGGTCACTCACCCCCTGGGGAACTGGCCTTGGTGTCCTTAGTGA
TGGTGCTGATGGATTTGCATGTGATTACTGTGGCTGTTGTTAATTAACCGCCTCTGGGCT
AAGCAGGTGGCAATATGACACTAT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-419, gnl|bosTau2|chr7 (13246147-13246560)
               

               
               1-419, gnl|Hg17|chr19 (5782737-5782091)
               

               
               1-419, gnl|Mm7|chr17 (54949837-54950264)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-419, gnl|bosTau2|chr7 (13246147-13246560)
               

               
               1-419, gnl|Hg17|chr19 (5782737-5782091)
               

               
               1-419, gnl|Mm7|chr17 (54949837-54950264)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               col (0.390016)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               col (0.390016)

	1-419, gnl\|bosTau2\|chr7 (13246147-13246560)
	1-419, gnl\|Hg17\|chr19 (5782737-5782091)
	1-419, gnl\|Mm7\|chr17 (54949837-54950264)