Non-Coding RNA Search

Ss1.1-rcol1007b_n12.5

Sequence:


               
               CCGGACACTACGCCTCCGCCACATTGTGGACGGCGTTCTGCTTCTGGCTCCTCTCCAACC
TGCTGCTTTCCATGCCGGTCCCGCATTATGGAGGCCTGGCTCTCCTCATCACCGGCGCCT
TCGCCCTCTTCTCTGTCTTCGCCTTCGCCTCTATCTCCAGCGTGCCTCTTTGCCAGCTCC
GCCTCGGCTCCTCCGAACTCGCCACTCACTACGGTGCTGCCTTTTGGATCACGCTGGCCA
CCGGCATCCTGTGCCTCCTCCTCGGAGCAGCGGTGGTGAGTCTCCACTACGCTCGACCCA
GCGCTCTTCGCACGTTCTTAGAGGGAAGTATCAAGGACTGCGATAGTCAGGCAAAAGGTA
GCTCGCCTCTCATCCTTAACAACCCACTGCATAAGCAGTCCGGGACCTCGGACTTAACCA
TCAGTACTAACCTGTGAAAAAGGACTCAACCTCGGACTCCTACTCTGCCTCCTTCCCCTC
TCCCGGGAGACCGGGGAGCAGTGCCGCCTGGCCTTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCGGACACTACGCCTCCGCCACATTGTGGACGGCGTTCTGCTTCTGGCTCCTCTCCAACC
TGCTGCTTTCCATGCCGGTCCCGCATTATGGAGGCCTGGCTCTCCTCATCACCGGCGCCT
TCGCCCTCTTCTCTGTCTTCGCCTTCGCCTCTATCTCCAGCGTGCCTCTTTGCCAGCTCC
GCCTCGGCTCCTCCGAACTCGCCACTCACTACGGTGCTGCCTTTTGGATCACGCTGGCCA
CCGGCATCCTGTGCCTCCTCCTCGGAGCAGCGGTGGTGAGTCTCCACTACGCTCGACCCA
GCGCTCTTCGCACGTTCTTAGAGGGAAGTATCAAGGACTGCGATAGTCAGGCAAAAGGTA
GCTCGCCTCTCATCCTTAACAACCCACTGCATAAGCAGTCCGGGACCTCGGACTTAACCA
TCAGTACTAACCTGTGAAAAAGGACTCAACCTCGGACTCCTACTCTGCCTCCTTCCCCTC
TCCCGGGAGACCGGGGAGCAGTGCCGCCTGGCCTTG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               32-244, gnl|bosTau2|chr10 (45060606-45060394)
               

               
               32-244, gnl|Hg17|chr15 (43196584-43196796)
               

               
               32-244, gnl|Mm7|chr2 (122042517-122042729)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               32-244, gnl|bosTau2|chr10 (45060606-45060394)
               

               
               32-244, gnl|Hg17|chr15 (43196584-43196796)
               

               
               32-244, gnl|Mm7|chr2 (122042517-122042729)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               col (0.390016)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               col (0.390016)

	32-244, gnl\|bosTau2\|chr10 (45060606-45060394)
	32-244, gnl\|Hg17\|chr15 (43196584-43196796)
	32-244, gnl\|Mm7\|chr2 (122042517-122042729)