Non-Coding RNA Search

Ss1.1-rcol1012b_h3.5

Sequence:


               
               TTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAGTATTTGAAGCTGATATAGTCTCTACTGT
GGGCATTACTTTATTCTTATGGCATCATTATGCTACTTAACTCTGTAGGGTTAGGTAATT
GCTCTTCTTCCTTCCAAAGGGAGACTATAATATGTGCTACCAAATTATTCTGACATTCTG
CTTAGGCTTTTGTTTTTTAGGTGCCTGTCTCATGCTTTTAAATAAATCTCTCTGTTATTG
GATTAAGCAAGAAGTTTAAATTAATCATGTTTGAACCCACTGTATGTCAGAACCAACCGG
GTCACCTTGCTGTACAGTTGAATTGACAGAACACTGTAAACCAGCTATAATGGAAAAAAT
AAAAACCCATTCTGGAGTTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAGTATTTGAAGCTGATATAGTCTCTACTGT
GGGCATTACTTTATTCTTATGGCATCATTATGCTACTTAACTCTGTAGGGTTAGGTAATT
GCTCTTCTTCCTTCCAAAGGGAGACTATAATATGTGCTACCAAATTATTCTGACATTCTG
CTTAGGCTTTTGTTTTTTAGGTGCCTGTCTCATGCTTTTAAATAAATCTCTCTGTTATTG
GATTAAGCAAGAAGTTTAAATTAATCATGTTTGAACCCACTGTATGTCAGAACCAACCGG
GTCACCTTGCTGTACAGTTGAATTGACAGAACACTGTAAACCAGCTATAATGGAAAAAAT
AAAAACCCATTCTGGAGTTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAA

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               18-336, gnl|bosTau2|chr16 (11477130-11477449)
               

               
               18-336, gnl|Hg17|chr1 (216619444-216619131)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               18-336, gnl|bosTau2|chr16 (11477130-11477449)
               

               
               18-336, gnl|Hg17|chr1 (216619444-216619131)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               col (0.195008)
               

               
               ecc (0.115035)
               

               
               jej (0.0989218)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               col (0.195008)
               

               
               ecc (0.115035)
               

               
               jej (0.0989218)

	18-336, gnl\|bosTau2\|chr16 (11477130-11477449)
	18-336, gnl\|Hg17\|chr1 (216619444-216619131)