Non-Coding RNA Search

Ss1.1-rcol1019b_j13.5

Sequence:


               
               ATTTTCTGATCTTTCACCAAAATGGTGGGTCTGAATAATTTGGAGGCTAAAGTTCATGAA
TTCACAAAACTGAACATTTGTGAACAGAAAACTCTTCCCATTTAAGATTGACTGTAGCAT
TGCACTAAATTGTTTGTATGTGAACTTTTTCTTCATTGTACCTGAAAGCTTAAATAACTG
TTCTCATTTTAGCAGTTCCTTACGTGAAACATTTATACTGGCTTTTCAGTTTGTGAACTT
GTACTTTGTAGTATCATGTACTTAGTTACATAATAGTGCTCTCTTCTAGATGAATCTTTT
TTTTTAAATGTTTTATATTGGAGGATATAAAGTCACTTCTTTTAATATTAATATTCTGTT
TTACACCTGATAACTGCCAAACAAAAGAAAAGGAAAAACTCAATGCATAAATTTTAATAT
ACCATAAGCAAAATGACACCAAACCTTAATATGTCTAAACAGTTAAATGTTTTACTGTCC
AAATGACTATTTAAGCAACAATGCCAAGAGAGAGGAAAATCTAAAGAGACTATTCATGGA
AATTGGCTTAAATTAAAATAATAAATGACTAAATAAAGCAAATGATGTGGCATATTTAGG
CATCATACAGCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATTTTCTGATCTTTCACCAAAATGGTGGGTCTGAATAATTTGGAGGCTAAAGTTCATGAA
TTCACAAAACTGAACATTTGTGAACAGAAAACTCTTCCCATTTAAGATTGACTGTAGCAT
TGCACTAAATTGTTTGTATGTGAACTTTTTCTTCATTGTACCTGAAAGCTTAAATAACTG
TTCTCATTTTAGCAGTTCCTTACGTGAAACATTTATACTGGCTTTTCAGTTTGTGAACTT
GTACTTTGTAGTATCATGTACTTAGTTACATAATAGTGCTCTCTTCTAGATGAATCTTTT
TTTTTAAATGTTTTATATTGGAGGATATAAAGTCACTTCTTTTAATATTAATATTCTGTT
TTACACCTGATAACTGCCAAACAAAAGAAAAGGAAAAACTCAATGCATAAATTTTAATAT
ACCATAAGCAAAATGACACCAAACCTTAATATGTCTAAACAGTTAAATGTTTTACTGTCC
AAATGACTATTTAAGCAACAATGCCAAGAGAGAGGAAAATCTAAAGAGACTATTCATGGA
AATTGGCTTAAATTAAAATAATAAATGACTAAATAAAGCAAATGATGTGGCATATTTAGG
CATCATACAGCC

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               143-560, gnl|bosTau2|chr10 (64284895-64285324)
               

               
               143-560, gnl|Hg17|chr14 (80759283-80759712)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               143-560, gnl|bosTau2|chr10 (64284895-64285324)
               

               
               143-560, gnl|Hg17|chr14 (80759283-80759712)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               col (0.195008)
               

               
               lin (0.145603)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               col (0.195008)
               

               
               lin (0.145603)

	143-560, gnl\|bosTau2\|chr10 (64284895-64285324)
	143-560, gnl\|Hg17\|chr14 (80759283-80759712)