Ss1.1-rcol1019b_l14.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CCTCTAGGTTTAAAAGTAGCTAATCCTTCCAGTGATTCAGATGGTCAGAGTCTTAAGGTG ATGCCTTGTTTGGCACCTGTAGCTGCCAAAGTTGGGTCCGTTGGACACAAAATGAACTTA ACAGGGAATGACCAGGAATGCCGCGAGAGCAAAGTGATGCCTACACTGGCACCTGTTGTG GCCAAACTGGGCAACTCTGGGGCCTCACCAAGTTCTACAGGGAAATGAACTTATTTGTCC TCAGGCAGAAACCAGGCTTTGAGGGGAAACCTCCTTTCTCTGAAGGCATCTGTTTATTTG TGTCATGGAACTGTGATCCTTGACTTTGATGCAGCGGATAATGGTAGAGAAAGGGGGTGG GGGTGCTGACCTTGGTATAAGAAATTACTACTATGAAATTCTGATCATGTTAAAATGTGT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CCTCTAGGTTTAAAAGTAGCTAATCCTTCCAGTGATTCAGATGGTCAGAGTCTTAAGGTG ATGCCTTGTTTGGCACCTGTAGCTGCCAAAGTTGGGTCCGTTGGACACAAAATGAACTTA ACAGGGAATGACCAGGAATGCCGCGAGAGCAAAGTGATGCCTACACTGGCACCTGTTGTG GCCAAACTGGGCAACTCTGGGGCCTCACCAAGTTCTACAGGGAAATGAACTTATTTGTCC TCAGGCAGAAACCAGGCTTTGAGGGGAAACCTCCTTTCTCTGAAGGCATCTGTTTATTTG TGTCATGGAACTGTGATCCTTGACTTTGATGCAGCGGATAATGGTAGAGAAAGGGGGTGG GGGTGCTGACCTTGGTATAAGAAATTACTACTATGAAATTCTGATCATGTTAAAATGTGT |
| Predicted RNA structure(s): 2 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
| 40-199, - strand, RNAz p=0.816568 | |
| 271-385, + strand, RNAz p=0.855613 |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 40-199, - strand, RNAz p=0.816568 | |
| 271-385, + strand, RNAz p=0.855613 |
| Aligned organism(s): 3 entry(ies) | More info |
| Aligned organism(s): 3 entry(ies) | Help | Less info |
| 1-420, gnl|bosTau2|chr10 (25180759-25180342) | |
| 1-420, gnl|Hg17|chr15 (39846543-39846970) | |
| 1-420, gnl|Mm7|chr2 (119705587-119706004) |
| Aligned organism(s): 3 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-420, gnl|bosTau2|chr10 (25180759-25180342) | |
| 1-420, gnl|Hg17|chr15 (39846543-39846970) | |
| 1-420, gnl|Mm7|chr2 (119705587-119706004) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| col (0.195008) | |
| fty (0.17584) |