Non-Coding RNA Search

Ss1.1-rcol1021b_k5.5

Sequence:


               
               AAAAGCAGTGTCAAGATTTTGATTTCTTGGGAGAAAGTCATGGGTCGAGGAGCAGCATCC
CAGGGAGTGGCCAGGGGGCCCGGCATCCGGCAATTGGTCCCTGTAGTTCCTGGAAAGAAA
TAGGCGGGGGAGGGGGGGGGTGCGTCCTTTCTTCAAGGCCTGTGAGGTCCCTCGCTTAGA
GACCAAAGTGAGACCCAAAAAGCAAAGAGGTCGTGGCTGCCCCAAGATTCCTGCTCGCTA
TGTGAATTTCAGTGCTGACTTCAAACCAGAGAAGCATCTTTCTTCTTTTAGGTGGAAATA
TATATATTTATTTTTTGTAAGTTAAACCATTCTTTCACATTGGATAAACCAAGCGTTTCT
TGGGGCTCTTTTTGTAATGACTTAACACTGGAAACGTGAACTTTTGCAAATAATTTGCAG
TAAAAAAATATTTTATTTCTTTCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAAAGCAGTGTCAAGATTTTGATTTCTTGGGAGAAAGTCATGGGTCGAGGAGCAGCATCC
CAGGGAGTGGCCAGGGGGCCCGGCATCCGGCAATTGGTCCCTGTAGTTCCTGGAAAGAAA
TAGGCGGGGGAGGGGGGGGGTGCGTCCTTTCTTCAAGGCCTGTGAGGTCCCTCGCTTAGA
GACCAAAGTGAGACCCAAAAAGCAAAGAGGTCGTGGCTGCCCCAAGATTCCTGCTCGCTA
TGTGAATTTCAGTGCTGACTTCAAACCAGAGAAGCATCTTTCTTCTTTTAGGTGGAAATA
TATATATTTATTTTTTGTAAGTTAAACCATTCTTTCACATTGGATAAACCAAGCGTTTCT
TGGGGCTCTTTTTGTAATGACTTAACACTGGAAACGTGAACTTTTGCAAATAATTTGCAG
TAAAAAAATATTTTATTTCTTTCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               135-447, gnl|bosTau2|chr25 (16452679-16452375)
               

               
               135-447, gnl|Hg17|chr16 (16144085-16144432)
               

               
               135-447, gnl|Mm7|chr16 (14021080-14021383)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               135-447, gnl|bosTau2|chr25 (16452679-16452375)
               

               
               135-447, gnl|Hg17|chr16 (16144085-16144432)
               

               
               135-447, gnl|Mm7|chr16 (14021080-14021383)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               col (0.195008)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               col (0.195008)

	135-447, gnl\|bosTau2\|chr25 (16452679-16452375)
	135-447, gnl\|Hg17\|chr16 (16144085-16144432)
	135-447, gnl\|Mm7\|chr16 (14021080-14021383)