Ss1.1-rcol1023b_g4.5
|
ATTCCCTGGCACTCTTGCTCTGACTGGCAGTTTTTCCCAGCGCCTCGCCCAGACCGATCT
TCTCATGCTGTCTTCAAGCCCTGCTTCCTGCACATCTCCCAGCCCGGACAAGGAGAACCC
GAGTAAGAAGGTCCAGTGGGCTTCTGGGAGGAGGAGGACATCATCCACAGACTCAGAGTC
AAAGTCCCACTCCGACCCTTCCAAAGTGTCCCGTTCCCGGAGACCCACTCGTCTGACGGT
GAAGTACGACCTGGGGCAGCTCCAGCGCTGGCTGGAGATGGAGCAGTGGGTGGACACTCA
GGTTCAGGAGCTCTTCCAGGATCAACCAACTCCTGAGCTGGAGATTGACCTGGAGGCTCT
CATGGAACTATCCACAGAGGAGCAGAAGACTCAGTTGGAGGCTGTTCTCCAAAACTGCCC
CCGCCCCACAGAGACTTTTATCTCTGAGCTGCTCGGTCAGCTCAAGAAACTCCGGAGACT
TAGTCGGCCTCAGAAATAAGCCTTGTGAGACTATCTTCAGGAGCCTCAGCACTGCCAGGT
CTGCCAGGAACCTCTGGATCCTGGGCTGAGAGGGAAACAGCTCCTTGGACTACAGACAAG
GAACATGGAGAACAAGGAGGGACATTTGGACACCCCTGTGTGTGTGTGGTCAGCTGCGCC
TTCTGGGAGCCAGTCATGGCTGTTGACCAGTGCTTTCCTTGGTAGCCAAACGGATAAAAC
CTTTGGGAGACC
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
ATTCCCTGGCACTCTTGCTCTGACTGGCAGTTTTTCCCAGCGCCTCGCCCAGACCGATCT
TCTCATGCTGTCTTCAAGCCCTGCTTCCTGCACATCTCCCAGCCCGGACAAGGAGAACCC
GAGTAAGAAGGTCCAGTGGGCTTCTGGGAGGAGGAGGACATCATCCACAGACTCAGAGTC
AAAGTCCCACTCCGACCCTTCCAAAGTGTCCCGTTCCCGGAGACCCACTCGTCTGACGGT
GAAGTACGACCTGGGGCAGCTCCAGCGCTGGCTGGAGATGGAGCAGTGGGTGGACACTCA
GGTTCAGGAGCTCTTCCAGGATCAACCAACTCCTGAGCTGGAGATTGACCTGGAGGCTCT
CATGGAACTATCCACAGAGGAGCAGAAGACTCAGTTGGAGGCTGTTCTCCAAAACTGCCC
CCGCCCCACAGAGACTTTTATCTCTGAGCTGCTCGGTCAGCTCAAGAAACTCCGGAGACT
TAGTCGGCCTCAGAAATAAGCCTTGTGAGACTATCTTCAGGAGCCTCAGCACTGCCAGGT
CTGCCAGGAACCTCTGGATCCTGGGCTGAGAGGGAAACAGCTCCTTGGACTACAGACAAG
GAACATGGAGAACAAGGAGGGACATTTGGACACCCCTGTGTGTGTGTGGTCAGCTGCGCC
TTCTGGGAGCCAGTCATGGCTGTTGACCAGTGCTTTCCTTGGTAGCCAAACGGATAAAAC
CTTTGGGAGACC
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
Human gene identifier and UTR site,
human gene reading direction
|
1-320, gnl|bosTau2|chr10 (26700495-26700179) |
|
1-320, gnl|Hg17|chr15 (38908198-38907876) |
|
1-320, gnl|Mm7|chr2 (118970714-118970390) |
| |
|
432-728, gnl|bosTau2|chr10 (26690478-26690167) |
|
432-728, gnl|canFam2|chr30 (10942547-10943333) |
|
432-728, gnl|echTel1|scaffold_289004 (397-1139) |
|
432-728, gnl|hg17|chr15 (38894891-38895645) |
|
432-728, gnl|Hg17|chr15 (38895253-38894947) |
|
432-728, gnl|mm7|chr2 (118958923-118959604) |
|
432-728, gnl|Mm7|chr2 (118959274-118958976) |
|
432-728, gnl|monDom2|scaffold_12 (1387580-1386620) |
|
432-728, gnl|oryCun1|scaffold_211631 (56036-56727) |
|
432-728, gnl|panTro1|chr16 (38808399-38809154) |
|
432-728, gnl|rheMac2|chr7 (19196543-19197294) |
|
432-728, gnl|rn3|chr3 (105627655-105628445) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
1-320, gnl|bosTau2|chr10 (26700495-26700179) |
|
1-320, gnl|Hg17|chr15 (38908198-38907876) |
|
1-320, gnl|Mm7|chr2 (118970714-118970390) |
| |
|
432-728, gnl|bosTau2|chr10 (26690478-26690167) |
|
432-728, gnl|canFam2|chr30 (10942547-10943333) |
|
432-728, gnl|echTel1|scaffold_289004 (397-1139) |
|
432-728, gnl|hg17|chr15 (38894891-38895645) |
|
432-728, gnl|Hg17|chr15 (38895253-38894947) |
|
432-728, gnl|mm7|chr2 (118958923-118959604) |
|
432-728, gnl|Mm7|chr2 (118959274-118958976) |
|
432-728, gnl|monDom2|scaffold_12 (1387580-1386620) |
|
432-728, gnl|oryCun1|scaffold_211631 (56036-56727) |
|
432-728, gnl|panTro1|chr16 (38808399-38809154) |
|
432-728, gnl|rheMac2|chr7 (19196543-19197294) |
|
432-728, gnl|rn3|chr3 (105627655-105628445) |
|
jej (0.395687) |
|
col (0.390016) |
|
jej (0.395687) |
|
col (0.390016) |
