Ss1.1-rcol1031b_d7.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TTGAGGAGTTTGCAGCTGGTCCTGCTCAGTCTGGAATTCTGTCAGATCGTGAAGTAGTAA ATCTCTTCCTTCATTTTACTGTCAACCCTAAGCCCCGAGTTGAATACATTGATCGACCAA GATGCTGCCTCAGAGGAAAGGAATGCTGCATCAATAGATTCCAGCAAGTAGAGAGCCGCT GGGGTTACAGTGGAACAAGCGATCGAATCAGGTTCACAGTTAATCGAAGAATCTCTATAG TTGGATTTGGTTTATATGGATCTATTCATGGTCCCACGGATTATCAAGTGAATATACAGA TCATTGAATATGAGAAAAAACAGACCCTGGGGCAAAATGATACTGGATTTAGTTGTGACG GGACTGCTAACACATTCAGGGTCATGTTCAAAGAACCTGTGGAGATCC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TTGAGGAGTTTGCAGCTGGTCCTGCTCAGTCTGGAATTCTGTCAGATCGTGAAGTAGTAA ATCTCTTCCTTCATTTTACTGTCAACCCTAAGCCCCGAGTTGAATACATTGATCGACCAA GATGCTGCCTCAGAGGAAAGGAATGCTGCATCAATAGATTCCAGCAAGTAGAGAGCCGCT GGGGTTACAGTGGAACAAGCGATCGAATCAGGTTCACAGTTAATCGAAGAATCTCTATAG TTGGATTTGGTTTATATGGATCTATTCATGGTCCCACGGATTATCAAGTGAATATACAGA TCATTGAATATGAGAAAAAACAGACCCTGGGGCAAAATGATACTGGATTTAGTTGTGACG GGACTGCTAACACATTCAGGGTCATGTTCAAAGAACCTGTGGAGATCC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 37 entry(ies) | More info |
| Aligned organism(s): 37 entry(ies) | Help | Less info |
| 18-213, gnl|bosTau2|chr21 (17386105-17386300) | |
| 18-213, gnl|canFam2|chr3 (57669348-57669566) | |
| 18-213, gnl|danRer3|chr22 (23487630-23487844) | |
| 18-213, gnl|dasNov1|scaffold_17030 (46329-46111) | |
| 18-213, gnl|echTel1|scaffold_297509 (1364-1145) | |
| 18-213, gnl|fr1|chrUn (66264284-66264506) | |
| 18-213, gnl|galGal2|chr10 (11792243-11792462) | |
| 18-213, gnl|hg17|chr15 (81489891-81490110) | |
| 18-213, gnl|Hg17|chr15 (81490085-81489890) | |
| 18-213, gnl|loxAfr1|scaffold_37027 (9496-9715) | |
| 18-213, gnl|mm7|chr7 (77674245-77674462) | |
| 18-213, gnl|Mm7|chr7 (77674439-77674244) | |
| 18-213, gnl|monDom2|scaffold_45 (1884420-1884645) | |
| 18-213, gnl|oryCun1|scaffold_208719 (57325-57106) | |
| 18-213, gnl|panTro1|chr16 (82289277-82289496) | |
| 18-213, gnl|rheMac2|chr7 (63501240-63501021) | |
| 18-213, gnl|rn3|chr1 (138095812-138096030) | |
| 18-213, gnl|tetNig1|chr5 (9592085-9592294) | |
| 18-213, gnl|xenTro1|scaffold_613 (198262-198048) | |
| 295-408, gnl|bosTau2|chr21 (17397499-17397612) | |
| 295-408, gnl|canFam2|chr3 (57659360-57659507) | |
| 295-408, gnl|danRer3|chr22 (23487138-23487284) | |
| 295-408, gnl|dasNov1|scaffold_107549 (4305-4443) | |
| 295-408, gnl|echTel1|scaffold_166368 (7550-7668) | |
| 295-408, gnl|fr1|chrUn (66263394-66263541) | |
| 295-408, gnl|galGal2|chr10 (11788308-11788455) | |
| 295-408, gnl|hg17|chr15 (81478468-81478615) | |
| 295-408, gnl|Hg17|chr15 (81478614-81478501) | |
| 295-408, gnl|loxAfr1|scaffold_2905 (5462-5609) | |
| 295-408, gnl|mm7|chr7 (77667451-77667598) | |
| 295-408, gnl|Mm7|chr7 (77667597-77667484) | |
| 295-408, gnl|monDom2|scaffold_45 (1878258-1878405) | |
| 295-408, gnl|panTro1|chr16 (82277760-82277907) | |
| 295-408, gnl|rheMac2|chr7 (63514677-63514530) | |
| 295-408, gnl|rn3|chr1 (138087148-138087295) | |
| 295-408, gnl|tetNig1|chr5 (9591632-9591779) | |
| 295-408, gnl|xenTro1|scaffold_613 (200668-200521) |
| Aligned organism(s): 37 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 18-213, gnl|bosTau2|chr21 (17386105-17386300) | |
| 18-213, gnl|canFam2|chr3 (57669348-57669566) | |
| 18-213, gnl|danRer3|chr22 (23487630-23487844) | |
| 18-213, gnl|dasNov1|scaffold_17030 (46329-46111) | |
| 18-213, gnl|echTel1|scaffold_297509 (1364-1145) | |
| 18-213, gnl|fr1|chrUn (66264284-66264506) | |
| 18-213, gnl|galGal2|chr10 (11792243-11792462) | |
| 18-213, gnl|hg17|chr15 (81489891-81490110) | |
| 18-213, gnl|Hg17|chr15 (81490085-81489890) | |
| 18-213, gnl|loxAfr1|scaffold_37027 (9496-9715) | |
| 18-213, gnl|mm7|chr7 (77674245-77674462) | |
| 18-213, gnl|Mm7|chr7 (77674439-77674244) | |
| 18-213, gnl|monDom2|scaffold_45 (1884420-1884645) | |
| 18-213, gnl|oryCun1|scaffold_208719 (57325-57106) | |
| 18-213, gnl|panTro1|chr16 (82289277-82289496) | |
| 18-213, gnl|rheMac2|chr7 (63501240-63501021) | |
| 18-213, gnl|rn3|chr1 (138095812-138096030) | |
| 18-213, gnl|tetNig1|chr5 (9592085-9592294) | |
| 18-213, gnl|xenTro1|scaffold_613 (198262-198048) | |
| 295-408, gnl|bosTau2|chr21 (17397499-17397612) | |
| 295-408, gnl|canFam2|chr3 (57659360-57659507) | |
| 295-408, gnl|danRer3|chr22 (23487138-23487284) | |
| 295-408, gnl|dasNov1|scaffold_107549 (4305-4443) | |
| 295-408, gnl|echTel1|scaffold_166368 (7550-7668) | |
| 295-408, gnl|fr1|chrUn (66263394-66263541) | |
| 295-408, gnl|galGal2|chr10 (11788308-11788455) | |
| 295-408, gnl|hg17|chr15 (81478468-81478615) | |
| 295-408, gnl|Hg17|chr15 (81478614-81478501) | |
| 295-408, gnl|loxAfr1|scaffold_2905 (5462-5609) | |
| 295-408, gnl|mm7|chr7 (77667451-77667598) | |
| 295-408, gnl|Mm7|chr7 (77667597-77667484) | |
| 295-408, gnl|monDom2|scaffold_45 (1878258-1878405) | |
| 295-408, gnl|panTro1|chr16 (82277760-82277907) | |
| 295-408, gnl|rheMac2|chr7 (63514677-63514530) | |
| 295-408, gnl|rn3|chr1 (138087148-138087295) | |
| 295-408, gnl|tetNig1|chr5 (9591632-9591779) | |
| 295-408, gnl|xenTro1|scaffold_613 (200668-200521) |
| Expressed library(ies): 4 entry(ies) | More info |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
| tbr (0.308356) | |
| sme (0.305437) | |
| col (0.195008) | |
| lun (0.150489) |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| tbr (0.308356) | |
| sme (0.305437) | |
| col (0.195008) | |
| lun (0.150489) |