Non-Coding RNA Search

Ss1.1-rcov09b_c11.5

Sequence:


               
               CGGAGGTTACCGCTGGTATCGCAGGACCTGCTCTGGCTGTGTAGAGAACATGGGCGCTCA
GCTGAGCAGCGGCTTGGGCACCGCGGAGCCGGCGCAGCCCCAGCCCCAGCCCGAGCCCCA
GCCCCAGCCCGAGCTCCAGCCCGCGGCGCCTGAGGGCCCTGGACAGCCCCAGCCCGAGCC
CAGCCCCTGGGGGCCGCTGGACGACGTGCGCTTCCTCATAGCCTGCACCGCCTGGTACTG
ACTGACTCGCCGCCTCCTGTCGTCTGGCTCGCCTCGCCTGGTCAGGCCCCTCTCAGGTCC
TTGTCTTTCCTCACCTTCCCCCCACCTCGGAGACTTGCGGAGAGTCGAGTCGGGGGACTG
GAGGGGACTGGAAGGAAGCTTCTGCAGCCTCGCCATGGGGCACAGTCTTGTCTCTGGCCC
CTTCTGCTATCCTGAATTTGTTCGCTTTTCAGCCTGCACCCAAACCCGCAAAGACCTTCG
TGCACATCCTCACTCCACAGTCTCTCCACACGACTGCGTCCTGGTTAGCCTTTCCCTTCA
CTGGCATCCAGAATCAGGCCAGGGCTCTTGGTATGAAGACCCCAAGGCTGCTGACCTAAC
CTCACCCTTTCTGTCCCTTATTGCCAAGAACTGGGCTCTTGCTTTTGTCCCTGGTTGTGG
CACCATGCACCTTGACTTCGGAAAAGACCTTGTGACCGTGACCCTACCCATGTGTCTCCT
GGGGGAAGTTGCTCCACCATCCTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGGAGGTTACCGCTGGTATCGCAGGACCTGCTCTGGCTGTGTAGAGAACATGGGCGCTCA
GCTGAGCAGCGGCTTGGGCACCGCGGAGCCGGCGCAGCCCCAGCCCCAGCCCGAGCCCCA
GCCCCAGCCCGAGCTCCAGCCCGCGGCGCCTGAGGGCCCTGGACAGCCCCAGCCCGAGCC
CAGCCCCTGGGGGCCGCTGGACGACGTGCGCTTCCTCATAGCCTGCACCGCCTGGTACTG
ACTGACTCGCCGCCTCCTGTCGTCTGGCTCGCCTCGCCTGGTCAGGCCCCTCTCAGGTCC
TTGTCTTTCCTCACCTTCCCCCCACCTCGGAGACTTGCGGAGAGTCGAGTCGGGGGACTG
GAGGGGACTGGAAGGAAGCTTCTGCAGCCTCGCCATGGGGCACAGTCTTGTCTCTGGCCC
CTTCTGCTATCCTGAATTTGTTCGCTTTTCAGCCTGCACCCAAACCCGCAAAGACCTTCG
TGCACATCCTCACTCCACAGTCTCTCCACACGACTGCGTCCTGGTTAGCCTTTCCCTTCA
CTGGCATCCAGAATCAGGCCAGGGCTCTTGGTATGAAGACCCCAAGGCTGCTGACCTAAC
CTCACCCTTTCTGTCCCTTATTGCCAAGAACTGGGCTCTTGCTTTTGTCCCTGGTTGTGG
CACCATGCACCTTGACTTCGGAAAAGACCTTGTGACCGTGACCCTACCCATGTGTCTCCT
GGGGGAAGTTGCTCCACCATCCTG

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               45-726, gnl|bosTau2|chr13 (45188586-45189277)
               

               
               45-726, gnl|Hg17|chr20 (33329151-33328454)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               45-726, gnl|bosTau2|chr13 (45188586-45189277)
               

               
               45-726, gnl|Hg17|chr20 (33329151-33328454)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               cov (0.264306)
               

               
               fbs (0.175346)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cov (0.264306)
               

               
               fbs (0.175346)

	45-726, gnl\|bosTau2\|chr13 (45188586-45189277)
	45-726, gnl\|Hg17\|chr20 (33329151-33328454)