Ss1.1-rcov11b_e18.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TTGGGAAGCCAGACAAACAGTAAAATATGAACGGAAGAGTGGATTATTTGGTTACTGAGG AAGAAATCAGTCTCACCAGAGGACCCTCAGGTCTGGGCTTCAACATCGTCGGTGGGACAG ATCAGCAGTATGTCTCCAATGACAGTGGCATCTTCGTCAGCCGCATCAAAGAGAATGGGG CTGCAGCCCTGGATGGGCGGCTCCAGGAGGGTGATAAGATCCTCTCGGTAAATGGCCAGG ACCTAAAGAACCTGCTGCACCAGGATGCTGTAGACCTCTTTCGTAATGCAGGCTACACTG TGTCCCTGAGAGTGCAGCACAGGTCACAGGTGCAGAATGGGCCTGTGGGACATCAAGGTG ATGGGGAACCAAGTGGTATTCCCATAACTGTGGTGCTGGTGCCAGTGTTTGCCCTCATCA TGGTAGCAGCCTGGGCCTTCATGAGATACCGCCATCAACCTTGAAAAGCTCGCTTTCTTC CAGTGCTCCCAAAGAAGAACACACATCCCTTTCTCTGACCTTCCTCCCCTGCCGTTCTCC CATAACTTTCCC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TTGGGAAGCCAGACAAACAGTAAAATATGAACGGAAGAGTGGATTATTTGGTTACTGAGG AAGAAATCAGTCTCACCAGAGGACCCTCAGGTCTGGGCTTCAACATCGTCGGTGGGACAG ATCAGCAGTATGTCTCCAATGACAGTGGCATCTTCGTCAGCCGCATCAAAGAGAATGGGG CTGCAGCCCTGGATGGGCGGCTCCAGGAGGGTGATAAGATCCTCTCGGTAAATGGCCAGG ACCTAAAGAACCTGCTGCACCAGGATGCTGTAGACCTCTTTCGTAATGCAGGCTACACTG TGTCCCTGAGAGTGCAGCACAGGTCACAGGTGCAGAATGGGCCTGTGGGACATCAAGGTG ATGGGGAACCAAGTGGTATTCCCATAACTGTGGTGCTGGTGCCAGTGTTTGCCCTCATCA TGGTAGCAGCCTGGGCCTTCATGAGATACCGCCATCAACCTTGAAAAGCTCGCTTTCTTC CAGTGCTCCCAAAGAAGAACACACATCCCTTTCTCTGACCTTCCTCCCCTGCCGTTCTCC CATAACTTTCCC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 20 entry(ies) | More info |
| Aligned organism(s): 20 entry(ies) | Help | Less info |
| 86-229, gnl|bosTau2|chr10 (50544682-50544539) | |
| 86-229, gnl|canFam2|chr8 (47092302-47092473) | |
| 86-229, gnl|danRer3|chr13 (39223508-39223675) | |
| 86-229, gnl|dasNov1|scaffold_24137 (42810-42981) | |
| 86-229, gnl|echTel1|scaffold_287589 (76117-76288) | |
| 86-229, gnl|fr1|chrUn (2790838-2790684) | |
| 86-229, gnl|hg17|chr14 (69924935-69925102) | |
| 86-229, gnl|Hg17|chr14 (69925081-69924938) | |
| 86-229, gnl|loxAfr1|scaffold_1754 (124290-124119) | |
| 86-229, gnl|mm7|chr12 (79473757-79473924) | |
| 86-229, gnl|Mm7|chr12 (79473903-79473760) | |
| 86-229, gnl|monDom2|scaffold_8 (66464047-66464216) | |
| 86-229, gnl|oryCun1|scaffold_171395 (8292-8124) | |
| 86-229, gnl|panTro1|chr15 (69644271-69644438) | |
| 86-229, gnl|rheMac2|chr7 (133492998-133493165) | |
| 86-229, gnl|rn3|chr6 (105372504-105372672) | |
| 86-229, gnl|tetNig1|chr10 (11344853-11344702) | |
| 323-552, gnl|bosTau2|chr10 (50532935-50532705) | |
| 323-552, gnl|Hg17|chr14 (69909602-69909376) | |
| 323-552, gnl|Mm7|chr12 (79464959-79464738) |
| Aligned organism(s): 20 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 86-229, gnl|bosTau2|chr10 (50544682-50544539) | |
| 86-229, gnl|canFam2|chr8 (47092302-47092473) | |
| 86-229, gnl|danRer3|chr13 (39223508-39223675) | |
| 86-229, gnl|dasNov1|scaffold_24137 (42810-42981) | |
| 86-229, gnl|echTel1|scaffold_287589 (76117-76288) | |
| 86-229, gnl|fr1|chrUn (2790838-2790684) | |
| 86-229, gnl|hg17|chr14 (69924935-69925102) | |
| 86-229, gnl|Hg17|chr14 (69925081-69924938) | |
| 86-229, gnl|loxAfr1|scaffold_1754 (124290-124119) | |
| 86-229, gnl|mm7|chr12 (79473757-79473924) | |
| 86-229, gnl|Mm7|chr12 (79473903-79473760) | |
| 86-229, gnl|monDom2|scaffold_8 (66464047-66464216) | |
| 86-229, gnl|oryCun1|scaffold_171395 (8292-8124) | |
| 86-229, gnl|panTro1|chr15 (69644271-69644438) | |
| 86-229, gnl|rheMac2|chr7 (133492998-133493165) | |
| 86-229, gnl|rn3|chr6 (105372504-105372672) | |
| 86-229, gnl|tetNig1|chr10 (11344853-11344702) | |
| 323-552, gnl|bosTau2|chr10 (50532935-50532705) | |
| 323-552, gnl|Hg17|chr14 (69909602-69909376) | |
| 323-552, gnl|Mm7|chr12 (79464959-79464738) |
| Expressed library(ies): 4 entry(ies) | More info |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
| nlu (0.191681) | |
| pla (0.133672) | |
| cov (0.132153) | |
| ldo (0.0970026) |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nlu (0.191681) | |
| pla (0.133672) | |
| cov (0.132153) | |
| ldo (0.0970026) |