Non-Coding RNA Search

Ss1.1-rcov11b_e22.5

Sequence:


               
               CCTTTCTACAAGGAGGGCAAGTTCGCATCCAAGGAGCTGTTCAAGGCCTTCGCCCGCCAC
CTCTCTCACTCGCTGACTCAGGACCCCTCTCGGGGCAGGAGCGTGAAGGAAGAGGCCCGC
GAGGTCATTAAGCAGCTGTTCCACGGCCGAGCCCGGTGCGAGAGTGAAGCTGACTGGCAC
GGCCTGTGTGGCCCGCGGAGATGACCGCCCGCTGCCTGACGGGACCAGCCTCGTCCCCAG
ACCCCACCACAGGCCAGCCTGGGCCTCGCTGGGGAACCGGGAAGGTGGGCGGCCTGCTGC
CGCCAGGAGGCCATGCTCTGTTCTCGCTGTCCCCCTCCACCCACGCCTGGCTTGGGCAGT
GGGCCCAGCCACCTCCCTGATCGAAGTTGGGGCTCCGAGGTCAGCCCAGCTTTCATTTTG
CTTGCAAAGCCTGAGGCCCTTTTTCTCCTAGCCTCTCCTGGCCCTTCTGGCTGGATTTTC
TGAGCCGCATTAGCAAGTGTCAGGAAGTGTGGGTGCTGCCAGAGGAACGGAGGGACAGAG
GTTCTTCCACCTCTTATACTAAACACATTTGAAGCCGGGGGTGAGGTGCACCGGTCCAAG
GCCTCAGGGGCTACCCAGGAAGCGCCGCTGCTGCCTCCTGTCCCCCGCCACCGCCCGCCC
TCGTGATACCAGCCTCCAGCCCCGCCCAGGTACCGAGCTCATGGGAAGAGGGCGGCAGCC
AGGCCCTGTCCCGCTCAGCCCCAGGGCAGGAGGCCGGCGGGACCGAGCTGTTTACCAGAG
GAATAAAGTGCG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCTTTCTACAAGGAGGGCAAGTTCGCATCCAAGGAGCTGTTCAAGGCCTTCGCCCGCCAC
CTCTCTCACTCGCTGACTCAGGACCCCTCTCGGGGCAGGAGCGTGAAGGAAGAGGCCCGC
GAGGTCATTAAGCAGCTGTTCCACGGCCGAGCCCGGTGCGAGAGTGAAGCTGACTGGCAC
GGCCTGTGTGGCCCGCGGAGATGACCGCCCGCTGCCTGACGGGACCAGCCTCGTCCCCAG
ACCCCACCACAGGCCAGCCTGGGCCTCGCTGGGGAACCGGGAAGGTGGGCGGCCTGCTGC
CGCCAGGAGGCCATGCTCTGTTCTCGCTGTCCCCCTCCACCCACGCCTGGCTTGGGCAGT
GGGCCCAGCCACCTCCCTGATCGAAGTTGGGGCTCCGAGGTCAGCCCAGCTTTCATTTTG
CTTGCAAAGCCTGAGGCCCTTTTTCTCCTAGCCTCTCCTGGCCCTTCTGGCTGGATTTTC
TGAGCCGCATTAGCAAGTGTCAGGAAGTGTGGGTGCTGCCAGAGGAACGGAGGGACAGAG
GTTCTTCCACCTCTTATACTAAACACATTTGAAGCCGGGGGTGAGGTGCACCGGTCCAAG
GCCTCAGGGGCTACCCAGGAAGCGCCGCTGCTGCCTCCTGTCCCCCGCCACCGCCCGCCC
TCGTGATACCAGCCTCCAGCCCCGCCCAGGTACCGAGCTCATGGGAAGAGGGCGGCAGCC
AGGCCCTGTCCCGCTCAGCCCCAGGGCAGGAGGCCGGCGGGACCGAGCTGTTTACCAGAG
GAATAAAGTGCG

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               103-788, gnl|bosTau2|chr19 (51483655-51484305)
               

               
               103-788, gnl|Hg17|chr17 (71135198-71134563)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               103-788, gnl|bosTau2|chr19 (51483655-51484305)
               

               
               103-788, gnl|Hg17|chr17 (71135198-71134563)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               cga (0.279096)
               

               
               nmm (0.132802)
               

               
               cov (0.132153)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cga (0.279096)
               

               
               nmm (0.132802)
               

               
               cov (0.132153)

	103-788, gnl\|bosTau2\|chr19 (51483655-51484305)
	103-788, gnl\|Hg17\|chr17 (71135198-71134563)