Ss1.1-rcov12b_g17.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGGTGGATTGCTGTGAACATTGAAATGAAAGCTCTCCTTCTAGGAGCTCGAGCCATTTCC TGGCTGCTGCACAAGAGTTTTTAAAGAGGGGTCGGAGCCCGCCTGTCACAGCGGGTCTTA AACACTGCGTGGGGCTGTACCTCGTGGTGATCTTGGTTTCTGACCATTGTCCATAGAAAT GCTCTCTCACCAACTTGCCCCACTGTCCCAATAACTCTCCCATTGAGGGGAAACTGTGAT TACCTCAACTTGAAGATGAAACTGTGATTGAAAAAAGTCAAAATGTTAAGTTTCAAAGCC AAAAAGGCAAAACTGGCTGAGGCCTCCGTAGACGCTCCTCAGCCTGCTCGGGTGTGTGAA GGGCACACTGGT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGGTGGATTGCTGTGAACATTGAAATGAAAGCTCTCCTTCTAGGAGCTCGAGCCATTTCC TGGCTGCTGCACAAGAGTTTTTAAAGAGGGGTCGGAGCCCGCCTGTCACAGCGGGTCTTA AACACTGCGTGGGGCTGTACCTCGTGGTGATCTTGGTTTCTGACCATTGTCCATAGAAAT GCTCTCTCACCAACTTGCCCCACTGTCCCAATAACTCTCCCATTGAGGGGAAACTGTGAT TACCTCAACTTGAAGATGAAACTGTGATTGAAAAAAGTCAAAATGTTAAGTTTCAAAGCC AAAAAGGCAAAACTGGCTGAGGCCTCCGTAGACGCTCCTCAGCCTGCTCGGGTGTGTGAA GGGCACACTGGT |
| Predicted RNA structure(s): 2 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
| 67-217, - strand, RNAz p=0.996056 | |
| 255-371, + strand, RNAz p=0.941674 |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 67-217, - strand, RNAz p=0.996056 | |
| 255-371, + strand, RNAz p=0.941674 |
| Aligned organism(s): 3 entry(ies) | More info |
| Aligned organism(s): 3 entry(ies) | Help | Less info |
| 1-371, gnl|bosTau2|chr13 (34640131-34639757) | |
| 1-371, gnl|Hg17|chr20 (3179433-3179045) | |
| 1-371, gnl|Mm7|chr2 (130448383-130448042) |
| Aligned organism(s): 3 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-371, gnl|bosTau2|chr13 (34640131-34639757) | |
| 1-371, gnl|Hg17|chr20 (3179433-3179045) | |
| 1-371, gnl|Mm7|chr2 (130448383-130448042) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| hlv (0.139256) | |
| cov (0.132153) |