Non-Coding RNA Search

Ss1.1-rcov24b_g9.5

Sequence:


               
               TCCCTAAAAGACCTTTAAAAAGTCACCTCATTACAGGGAGCTCACTACCTGTCGAGGAGG
CAGCTCATTTTGTTTTTGGAAGGCCCTCTCCTGACTTTCTCGATAAATTCCAGCTAATGG
AGCCACCTGGAACCAGCTTGGTCCCCTCTTTGCACAGCAGCCCTTGAAACATCTGAAGGA
GTCTGTGTTCCTTTTACACCTGAGAGGCACCAGCTTGGGACAGTATTGCTAAGGAAACTC
AAGGATTTCCCCTCGGATCTTTATTCCCCTCCAGCCCACAAGGGGCTTAGCTAGGTGAGC
ATTTACTTTCGCCACAGGAGGTGGCGTTCAGGTTTTAGAAGCAGCTCAAGAGTGGGAGGT
GGGGCGTGTTTCCAGCTCAGGCTGCGAGGGGGCCGTCCCCTCAGAGGTGCTAGCTCCTGG
CTCCAGCAGGCACAGCCCTTCTCCTTGTTCCAACAAAGGAAATGCTCTGAGAGAATAATT
TTAAAGAGAAAAGCAAAACCATATGCTTACACAAAGGGTTCTATTATTTCAGACTTCATT
GGTTTGCATGTTAGATGTTTCTAAGAGAAAAGAGACTGCCTGCTGGGCATTCTGTGAGAA
GCAAACAGATTAACTGTACAATCTCAGATTTTACTAAAATGCAAATGTACTGTTTCAATT
TCTTGTTAACTTATTTCTTTAAATTACTTACAAACA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCCCTAAAAGACCTTTAAAAAGTCACCTCATTACAGGGAGCTCACTACCTGTCGAGGAGG
CAGCTCATTTTGTTTTTGGAAGGCCCTCTCCTGACTTTCTCGATAAATTCCAGCTAATGG
AGCCACCTGGAACCAGCTTGGTCCCCTCTTTGCACAGCAGCCCTTGAAACATCTGAAGGA
GTCTGTGTTCCTTTTACACCTGAGAGGCACCAGCTTGGGACAGTATTGCTAAGGAAACTC
AAGGATTTCCCCTCGGATCTTTATTCCCCTCCAGCCCACAAGGGGCTTAGCTAGGTGAGC
ATTTACTTTCGCCACAGGAGGTGGCGTTCAGGTTTTAGAAGCAGCTCAAGAGTGGGAGGT
GGGGCGTGTTTCCAGCTCAGGCTGCGAGGGGGCCGTCCCCTCAGAGGTGCTAGCTCCTGG
CTCCAGCAGGCACAGCCCTTCTCCTTGTTCCAACAAAGGAAATGCTCTGAGAGAATAATT
TTAAAGAGAAAAGCAAAACCATATGCTTACACAAAGGGTTCTATTATTTCAGACTTCATT
GGTTTGCATGTTAGATGTTTCTAAGAGAAAAGAGACTGCCTGCTGGGCATTCTGTGAGAA
GCAAACAGATTAACTGTACAATCTCAGATTTTACTAAAATGCAAATGTACTGTTTCAATT
TCTTGTTAACTTATTTCTTTAAATTACTTACAAACA

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               3-682, gnl|bosTau2|chr1 (51944388-51943722)
               

               
               3-682, gnl|Hg17|chr3 (185017054-185016392)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-682, gnl|bosTau2|chr1 (51944388-51943722)
               

               
               3-682, gnl|Hg17|chr3 (185017054-185016392)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               fce (0.271592)
               

               
               hyp (0.142837)
               

               
               cov (0.132153)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fce (0.271592)
               

               
               hyp (0.142837)
               

               
               cov (0.132153)

	3-682, gnl\|bosTau2\|chr1 (51944388-51943722)
	3-682, gnl\|Hg17\|chr3 (185017054-185016392)