Non-Coding RNA Search

Ss1.1-rcov26b_d23.5

Sequence:


               
               ATAAATGAGGACTAGAGGGAGAAGGAGTTGAAATCAGAAGTTTTTCGCTCACGAGTCTCA
TTCCAAAGGAAGCAAGAGAATTGTGCGGCGTCATCTTTAGTCGGGGCACGGGAAGGCCCG
AAAAGCCCATTTTAACTAGGGGCCTCCTTAACCAAAGTGAAAGGGGATCAGAAGCGGTGC
AGCTTCACTTTCCCTTCTCCAACATGGCCTCCAGGGCAGCAAGGAGAAATGGGAGGTTTG
CTCTGGACCCCGCCCGCGCCTCGGGGCTGGCCAATCACCGCGGACAGTTCTAGTTGCGCA
AGCGCACTACAGCCAGGGACGAGCACGCGGCCACTCTCCCCTCACTCCGACTGCCCACGA
TCACTCGTCCGCAGAAATGTCAGCCGCCGGCGCCCG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATAAATGAGGACTAGAGGGAGAAGGAGTTGAAATCAGAAGTTTTTCGCTCACGAGTCTCA
TTCCAAAGGAAGCAAGAGAATTGTGCGGCGTCATCTTTAGTCGGGGCACGGGAAGGCCCG
AAAAGCCCATTTTAACTAGGGGCCTCCTTAACCAAAGTGAAAGGGGATCAGAAGCGGTGC
AGCTTCACTTTCCCTTCTCCAACATGGCCTCCAGGGCAGCAAGGAGAAATGGGAGGTTTG
CTCTGGACCCCGCCCGCGCCTCGGGGCTGGCCAATCACCGCGGACAGTTCTAGTTGCGCA
AGCGCACTACAGCCAGGGACGAGCACGCGGCCACTCTCCCCTCACTCCGACTGCCCACGA
TCACTCGTCCGCAGAAATGTCAGCCGCCGGCGCCCG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-246, gnl|bosTau2|chr3 (614328-614566)
               

               
               1-246, gnl|Hg17|chr1 (164637354-164637117)
               

               
               1-246, gnl|Mm7|chr1 (165431393-165431739)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-246, gnl|bosTau2|chr3 (614328-614566)
               

               
               1-246, gnl|Hg17|chr1 (164637354-164637117)
               

               
               1-246, gnl|Mm7|chr1 (165431393-165431739)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               cag (0.151194)
               

               
               cov (0.132153)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cag (0.151194)
               

               
               cov (0.132153)

	1-246, gnl\|bosTau2\|chr3 (614328-614566)
	1-246, gnl\|Hg17\|chr1 (164637354-164637117)
	1-246, gnl\|Mm7\|chr1 (165431393-165431739)