Non-Coding RNA Search

Ss1.1-rcov27b_d8.5

Sequence:


               
               CTAGAGCCGGAATGTCTTACTACACTTCCCCAGGTCTCCACGTGCAGCATATGGGAGCAT
CCCATGGTGTCACGAGGCCTTCACCGCGGAGAAGCAACAGGCCTGACAAATTCAAGCGGA
CCACACCGCCTCCGTCTCCCAACACACAGACCCCTGTCCAGCCACCGCCGCCTCCGCCTC
CGCCACCCATGCAGCCCGCGGTCCCCTCGGCAGCCACCTCGCCGCCCGCCCCCTCGCCAC
ATTCGGTGCACCCCTCCTCCCAGCCTTAATGCATGTGCTTAGTCCGACTGTCACGTGGGG
ACTCGTACAGTGGAGCCGTCTCCTCGACGCCAAAGGCTTCCTTCCCTGGCATATTTGGAT
CTGACTTATTTGCACTGAGGTTATGTAGGCTTCACTCTTCATTATGTTGTAAATGTTTGT
CGGCAACGCAGCCAGTGTTGTGGGTCTACAACACTACACGACGACTTTTTTCCATCGGTG
TTTTACTTGAATCTACACGTACGTCCATTCCCTGGCTGGAACATTGGCTATTCGATGTTT
GGTAGTTCAGCAGCGGTGTGCAATTTTCGCTTGGCCCCAGAGCTTCATTCCCCTGGCCTG
TAGGTTTGTAAAATAAAAAAGGGATATCTTTTTATATTTTCCCCCCATGAATTGGCAGAA
TATTACTGAGCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTAGAGCCGGAATGTCTTACTACACTTCCCCAGGTCTCCACGTGCAGCATATGGGAGCAT
CCCATGGTGTCACGAGGCCTTCACCGCGGAGAAGCAACAGGCCTGACAAATTCAAGCGGA
CCACACCGCCTCCGTCTCCCAACACACAGACCCCTGTCCAGCCACCGCCGCCTCCGCCTC
CGCCACCCATGCAGCCCGCGGTCCCCTCGGCAGCCACCTCGCCGCCCGCCCCCTCGCCAC
ATTCGGTGCACCCCTCCTCCCAGCCTTAATGCATGTGCTTAGTCCGACTGTCACGTGGGG
ACTCGTACAGTGGAGCCGTCTCCTCGACGCCAAAGGCTTCCTTCCCTGGCATATTTGGAT
CTGACTTATTTGCACTGAGGTTATGTAGGCTTCACTCTTCATTATGTTGTAAATGTTTGT
CGGCAACGCAGCCAGTGTTGTGGGTCTACAACACTACACGACGACTTTTTTCCATCGGTG
TTTTACTTGAATCTACACGTACGTCCATTCCCTGGCTGGAACATTGGCTATTCGATGTTT
GGTAGTTCAGCAGCGGTGTGCAATTTTCGCTTGGCCCCAGAGCTTCATTCCCCTGGCCTG
TAGGTTTGTAAAATAAAAAAGGGATATCTTTTTATATTTTCCCCCCATGAATTGGCAGAA
TATTACTGAGCT

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               74-672, gnl|bosTau2|chr28 (11258342-11258947)
               

               
               74-672, gnl|Hg17|chr10 (61222876-61222280)
               

               
               74-672, gnl|Mm7|chr10 (69791288-69791927)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               74-672, gnl|bosTau2|chr28 (11258342-11258947)
               

               
               74-672, gnl|Hg17|chr10 (61222876-61222280)
               

               
               74-672, gnl|Mm7|chr10 (69791288-69791927)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               csp (0.161186)
               

               
               cov (0.132153)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               csp (0.161186)
               

               
               cov (0.132153)

	74-672, gnl\|bosTau2\|chr28 (11258342-11258947)
	74-672, gnl\|Hg17\|chr10 (61222876-61222280)
	74-672, gnl\|Mm7\|chr10 (69791288-69791927)