Non-Coding RNA Search

Ss1.1-rcov28b_o21.5

Sequence:


               
               CGGTTAGCGGCTCTGTGGAGTTAGACTTCCCCAGCTTTTCTCCAATGGCTTCGCAGGAAA
ACTGCCTGGAAAAGTTCATCCCGGACCACAGTGAAGGCGTCGTAGAAACGGACTCCATTT
TAGAAGCAGCTGTAAATAGCATCCTAGAGTGTTAATAGCCGCAGTCCTCCCCGCCCCGGC
CCGGGACCCGCCCGCCCCGCGGACAAGTCACATCCTTCCCTGGCAAAAGCGATGGAAACG
GTCTCCTGTCTCCAGCCTGCTTGATCTTTCATCACAGGTTATTCTTTCTAATCTCGACCC
CATCCTTTGTTTCAGAGCAATACTCGTCGTGGTTACAGGGAAATCCTTTAGGAAGACTGA
TCCTTGTTAGAAAGCAGTCTGATAGGCCCTACACATTTCAAGTGTTGGGAAAGTGCTTAG
AGTCCTTTTTGGTTGGTTTTATTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGGTTAGCGGCTCTGTGGAGTTAGACTTCCCCAGCTTTTCTCCAATGGCTTCGCAGGAAA
ACTGCCTGGAAAAGTTCATCCCGGACCACAGTGAAGGCGTCGTAGAAACGGACTCCATTT
TAGAAGCAGCTGTAAATAGCATCCTAGAGTGTTAATAGCCGCAGTCCTCCCCGCCCCGGC
CCGGGACCCGCCCGCCCCGCGGACAAGTCACATCCTTCCCTGGCAAAAGCGATGGAAACG
GTCTCCTGTCTCCAGCCTGCTTGATCTTTCATCACAGGTTATTCTTTCTAATCTCGACCC
CATCCTTTGTTTCAGAGCAATACTCGTCGTGGTTACAGGGAAATCCTTTAGGAAGACTGA
TCCTTGTTAGAAAGCAGTCTGATAGGCCCTACACATTTCAAGTGTTGGGAAAGTGCTTAG
AGTCCTTTTTGGTTGGTTTTATTT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-444, gnl|bosTau2|chr23 (12949072-12949510)
               

               
               1-444, gnl|Hg17|chr6 (42941008-42941462)
               

               
               1-444, gnl|Mm7|chr17 (44931072-44930632)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-444, gnl|bosTau2|chr23 (12949072-12949510)
               

               
               1-444, gnl|Hg17|chr6 (42941008-42941462)
               

               
               1-444, gnl|Mm7|chr17 (44931072-44930632)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               mcp (0.170648)
               

               
               csp (0.161186)
               

               
               cov (0.132153)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               mcp (0.170648)
               

               
               csp (0.161186)
               

               
               cov (0.132153)

	1-444, gnl\|bosTau2\|chr23 (12949072-12949510)
	1-444, gnl\|Hg17\|chr6 (42941008-42941462)
	1-444, gnl\|Mm7\|chr17 (44931072-44930632)