Ss1.1-rcov35b_b5.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CCTGGAGATGACATAGTCTTAATGGCAGAAGCTCTGGAGAAGCTCTTCTTGCAAAAAATC AACGAACTGCCCACAGAAGAAACTGAGATCATGATAGTCCAGGCAAAAGGAAGAGGACGT GGGAGGAAAGAAGCAGTGTCGGCAAAACCTGGCGTCTCTACGGTACCAAACACAACACAA GCATCGACTCCTCCGCAGACCCAGACCCCTCAGCAGAATCCTCCACCCGTGCAGGCCACT CCTCACCCCTTCCCTGCCGTCACCCCAGACCTCATCGTCCAGACCCCTGTTATGACAGTG GTACCTCCCCAGCCACTGCAGACACCCCCGCCGGTGCCCCCTCAACCACCACCCCCACCC GCTCCAGCCCCCCAGCCCGTGCAGAGCCACCCACCCATCATTGCGGCCACCCCACAACCT GTGAAGACAAAGAAGGGGGTTAAGAGGAAAGCAGACACCACCACCCCCACCACCATCGAC CCCATTCACGAGCCTCCCTCACTGCCCCCGGAGCCCAAGACCACCAAGCTGGGCCCCCGG CGGGAGAGCAGCCGGCCTGTTAAGCCTCCGAAGAAGGATGTGCCCGACTCGCAGCAGCAC CCAGCGCCAGATAAGAGCAGCAAGGTCTCAGAGCAGCTTAAGTGCTGTAGTGGCATCCTC AAGGAAATGTTTGCCAAGAAGCATGCGGCTTACGCCTGGCCATTCTACAAGCCCGTGGAC GTGGAGGCGCTGGGCCTACATGACTACTGTGACATCATCAAGCACCCCATGGACATGAGC ACTATAAAGTCTAAACTGGAGGCCCGTGAGTACCGCGATGCTCAGGAATTTGGTGCCGAT GTCCGATTGATGTTCTCCAACTGCTACAAGTACAACCCTCCTGACCATGAGGTGGTGGCC ATGGCCCGCAAG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CCTGGAGATGACATAGTCTTAATGGCAGAAGCTCTGGAGAAGCTCTTCTTGCAAAAAATC AACGAACTGCCCACAGAAGAAACTGAGATCATGATAGTCCAGGCAAAAGGAAGAGGACGT GGGAGGAAAGAAGCAGTGTCGGCAAAACCTGGCGTCTCTACGGTACCAAACACAACACAA GCATCGACTCCTCCGCAGACCCAGACCCCTCAGCAGAATCCTCCACCCGTGCAGGCCACT CCTCACCCCTTCCCTGCCGTCACCCCAGACCTCATCGTCCAGACCCCTGTTATGACAGTG GTACCTCCCCAGCCACTGCAGACACCCCCGCCGGTGCCCCCTCAACCACCACCCCCACCC GCTCCAGCCCCCCAGCCCGTGCAGAGCCACCCACCCATCATTGCGGCCACCCCACAACCT GTGAAGACAAAGAAGGGGGTTAAGAGGAAAGCAGACACCACCACCCCCACCACCATCGAC CCCATTCACGAGCCTCCCTCACTGCCCCCGGAGCCCAAGACCACCAAGCTGGGCCCCCGG CGGGAGAGCAGCCGGCCTGTTAAGCCTCCGAAGAAGGATGTGCCCGACTCGCAGCAGCAC CCAGCGCCAGATAAGAGCAGCAAGGTCTCAGAGCAGCTTAAGTGCTGTAGTGGCATCCTC AAGGAAATGTTTGCCAAGAAGCATGCGGCTTACGCCTGGCCATTCTACAAGCCCGTGGAC GTGGAGGCGCTGGGCCTACATGACTACTGTGACATCATCAAGCACCCCATGGACATGAGC ACTATAAAGTCTAAACTGGAGGCCCGTGAGTACCGCGATGCTCAGGAATTTGGTGCCGAT GTCCGATTGATGTTCTCCAACTGCTACAAGTACAACCCTCCTGACCATGAGGTGGTGGCC ATGGCCCGCAAG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 25 entry(ies) | More info |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
| 135-426, gnl|bosTau2|chr7 (7035693-7035984) | |
| 135-426, gnl|Hg17|chr19 (15237456-15237165) | |
| 135-426, gnl|Mm7|chr17 (30414499-30414205) | |
| 430-789, gnl|bosTau2|chr11 (83901164-83901535) | |
| 430-789, gnl|Hg17|chr9 (133943130-133942759) | |
| 430-789, gnl|Mm7|chr2 (27467139-27466768) | |
| 797-912, gnl|bosTau2|chr11 (83904097-83904212) | |
| 797-912, gnl|canFam2|chr9 (53638516-53638645) | |
| 797-912, gnl|danRer3|chr8 (38622024-38621895) | |
| 797-912, gnl|dasNov1|scaffold_45766 (310-439) | |
| 797-912, gnl|echTel1|scaffold_175871 (2503-2374) | |
| 797-912, gnl|fr1|chrUn (20698405-20698534) | |
| 797-912, gnl|galGal2|chr17 (3245603-3245474) | |
| 797-912, gnl|hg17|chr9 (133939974-133940103) | |
| 797-912, gnl|Hg17|chr9 (133940090-133939975) | |
| 797-912, gnl|loxAfr1|scaffold_83175 (5618-5747) | |
| 797-912, gnl|mm7|chr2 (27464225-27464354) | |
| 797-912, gnl|Mm7|chr2 (27464341-27464226) | |
| 797-912, gnl|monDom2|scaffold_51 (10706882-10707011) | |
| 797-912, gnl|oryCun1|scaffold_148158 (4501-4375) | |
| 797-912, gnl|panTro1|chr11 (119053993-119054122) | |
| 797-912, gnl|rheMac2|chr15 (4495720-4495591) | |
| 797-912, gnl|rn3|chr3 (6379500-6379629) | |
| 797-912, gnl|tetNig1|chr4 (5671896-5671767) | |
| 797-912, gnl|xenTro1|scaffold_95 (1965862-1965733) |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 135-426, gnl|bosTau2|chr7 (7035693-7035984) | |
| 135-426, gnl|Hg17|chr19 (15237456-15237165) | |
| 135-426, gnl|Mm7|chr17 (30414499-30414205) | |
| 430-789, gnl|bosTau2|chr11 (83901164-83901535) | |
| 430-789, gnl|Hg17|chr9 (133943130-133942759) | |
| 430-789, gnl|Mm7|chr2 (27467139-27466768) | |
| 797-912, gnl|bosTau2|chr11 (83904097-83904212) | |
| 797-912, gnl|canFam2|chr9 (53638516-53638645) | |
| 797-912, gnl|danRer3|chr8 (38622024-38621895) | |
| 797-912, gnl|dasNov1|scaffold_45766 (310-439) | |
| 797-912, gnl|echTel1|scaffold_175871 (2503-2374) | |
| 797-912, gnl|fr1|chrUn (20698405-20698534) | |
| 797-912, gnl|galGal2|chr17 (3245603-3245474) | |
| 797-912, gnl|hg17|chr9 (133939974-133940103) | |
| 797-912, gnl|Hg17|chr9 (133940090-133939975) | |
| 797-912, gnl|loxAfr1|scaffold_83175 (5618-5747) | |
| 797-912, gnl|mm7|chr2 (27464225-27464354) | |
| 797-912, gnl|Mm7|chr2 (27464341-27464226) | |
| 797-912, gnl|monDom2|scaffold_51 (10706882-10707011) | |
| 797-912, gnl|oryCun1|scaffold_148158 (4501-4375) | |
| 797-912, gnl|panTro1|chr11 (119053993-119054122) | |
| 797-912, gnl|rheMac2|chr15 (4495720-4495591) | |
| 797-912, gnl|rn3|chr3 (6379500-6379629) | |
| 797-912, gnl|tetNig1|chr4 (5671896-5671767) | |
| 797-912, gnl|xenTro1|scaffold_95 (1965862-1965733) |
| Expressed library(ies): 7 entry(ies) | More info |
| Expressed library(ies): 7 entry(ies) | Help | Less info |
| fce (0.271592) | |
| fty (0.17584) | |
| pla (0.133672) | |
| cov (0.132153) | |
| bla (0.124347) | |
| clu (0.119646) | |
| pgl (0.118483) |
| Expressed library(ies): 7 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| fce (0.271592) | |
| fty (0.17584) | |
| pla (0.133672) | |
| cov (0.132153) | |
| bla (0.124347) | |
| clu (0.119646) | |
| pgl (0.118483) |