Non-Coding RNA Search

Ss1.1-rcov35b_f8.5

Sequence:


               
               CAGAATCCCATCGCCATCCTCCAAAACCTGGACTGCCACCTGCCCTCTTCCCTCCAGTAC
ATCGTACAGGGCTGCTGGGCACAGTTGTGCAGGCTATGTACTGCACAAGGGCAACTCATC
CAAGGAGACACCACTTGCATCCTAAACTTGTATATTTATTACAGCAATTTTCTGAATCTC
GAGGAAGGGGCACCATTTACCTATTCGCACAAAGGCACCACAGGGGCTACAATGTCAGAG
GGATCAGACCCTGCCTCCTTCAGGGGTTCTCCTAGCAAGGGGGCTACCTGCTGGTTTTAA
TCGGGAGAGCCAATGCAACTCCCTTCCTGCAAGCCGCCCTCCAAGGCCTGCCCCACACCA
TGAGGGGAAAGGCGGGCAGGGGCCCCCCCCATTAGGTCCCCGAAGCCTGATTTTCCCCAA
GTCCTGGCCCCTCTGGCACTCTGGAAGCGGTACTGTATCTCTCTCCAAGGCCTGTTCAAG
ACTAAGTGCATTTACAAATCTCTGAGAATGTTTTTTTTTTATACTAAAATTGACCATTAT
ATTCTACTGTGAGAAGTGCAGTCTGCACTATATTGTTTTAAAAACGAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAGAATCCCATCGCCATCCTCCAAAACCTGGACTGCCACCTGCCCTCTTCCCTCCAGTAC
ATCGTACAGGGCTGCTGGGCACAGTTGTGCAGGCTATGTACTGCACAAGGGCAACTCATC
CAAGGAGACACCACTTGCATCCTAAACTTGTATATTTATTACAGCAATTTTCTGAATCTC
GAGGAAGGGGCACCATTTACCTATTCGCACAAAGGCACCACAGGGGCTACAATGTCAGAG
GGATCAGACCCTGCCTCCTTCAGGGGTTCTCCTAGCAAGGGGGCTACCTGCTGGTTTTAA
TCGGGAGAGCCAATGCAACTCCCTTCCTGCAAGCCGCCCTCCAAGGCCTGCCCCACACCA
TGAGGGGAAAGGCGGGCAGGGGCCCCCCCCATTAGGTCCCCGAAGCCTGATTTTCCCCAA
GTCCTGGCCCCTCTGGCACTCTGGAAGCGGTACTGTATCTCTCTCCAAGGCCTGTTCAAG
ACTAAGTGCATTTACAAATCTCTGAGAATGTTTTTTTTTTATACTAAAATTGACCATTAT
ATTCTACTGTGAGAAGTGCAGTCTGCACTATATTGTTTTAAAAACGAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-588, gnl|bosTau2|chr17 (35834325-35834936)
               

               
               1-588, gnl|Hg17|chr12 (108670420-108670995)
               

               
               1-588, gnl|Mm7|chr5 (113833424-113834026)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-588, gnl|bosTau2|chr17 (35834325-35834936)
               

               
               1-588, gnl|Hg17|chr12 (108670420-108670995)
               

               
               1-588, gnl|Mm7|chr5 (113833424-113834026)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               cov (0.132153)
               

               
               pgl (0.118483)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cov (0.132153)
               

               
               pgl (0.118483)

	1-588, gnl\|bosTau2\|chr17 (35834325-35834936)
	1-588, gnl\|Hg17\|chr12 (108670420-108670995)
	1-588, gnl\|Mm7\|chr5 (113833424-113834026)