Non-Coding RNA Search

Ss1.1-rcov36b_h9.5

Sequence:


               
               CAGGTTGGAGGATTACACCTTCGTGGTGCGGGGCCTGCTGGACTTGTACGAAGCCTCACA
GGAGAGCGCGTGGCTCGAGTGGGCTCTGCGGCTGCAGTGACACGCAGGACAGGCTCTTCT
GGGACTCCCGGGGCGGCGGCTACTTCTGCAGTGAGGCTGAGCTGGGGGCTGGCCTGCCCC
TGCGTCTGAAGGACGACCAGGACGGTGCAGAGCCCAGCGCCAACTCCGTGTCGGCCCACA
ACCTGCTTCGGCTGCACGGTTTCACGGGCCACAAGGACTGGATGGATAAGTGCGTGTGCC
TGTTGACCGCCTTTTCGGAGCGCATGCGCCGGGTCCCAGTGGCATTGCCGGAGATGGTCC
GCGCCCTCTCAGCCCACCAGCAGACCCTCAAGCAGATTGTCATCTGTGGCGACCCCCAGG
CCAAGGACACCAAGGCTCTGCTGCAGTGTGTCCACTCCATCTACATCCCAAACAAGGTGC
TGATTCTGGCAGATGGGGACCCCTCGAGCTTCTTGTCCCGCCAGCTGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAGGTTGGAGGATTACACCTTCGTGGTGCGGGGCCTGCTGGACTTGTACGAAGCCTCACA
GGAGAGCGCGTGGCTCGAGTGGGCTCTGCGGCTGCAGTGACACGCAGGACAGGCTCTTCT
GGGACTCCCGGGGCGGCGGCTACTTCTGCAGTGAGGCTGAGCTGGGGGCTGGCCTGCCCC
TGCGTCTGAAGGACGACCAGGACGGTGCAGAGCCCAGCGCCAACTCCGTGTCGGCCCACA
ACCTGCTTCGGCTGCACGGTTTCACGGGCCACAAGGACTGGATGGATAAGTGCGTGTGCC
TGTTGACCGCCTTTTCGGAGCGCATGCGCCGGGTCCCAGTGGCATTGCCGGAGATGGTCC
GCGCCCTCTCAGCCCACCAGCAGACCCTCAAGCAGATTGTCATCTGTGGCGACCCCCAGG
CCAAGGACACCAAGGCTCTGCTGCAGTGTGTCCACTCCATCTACATCCCAAACAAGGTGC
TGATTCTGGCAGATGGGGACCCCTCGAGCTTCTTGTCCCGCCAGCTGC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               6-213, gnl|bosTau2|chr19 (28871937-28871730)
               

               
               6-213, gnl|Hg17|chr17 (45984352-45984559)
               

               
               6-213, gnl|Mm7|chr11 (94590850-94590654)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               6-213, gnl|bosTau2|chr19 (28871937-28871730)
               

               
               6-213, gnl|Hg17|chr17 (45984352-45984559)
               

               
               6-213, gnl|Mm7|chr11 (94590850-94590654)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               elu (0.385356)
               

               
               cov (0.132153)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               elu (0.385356)
               

               
               cov (0.132153)

	6-213, gnl\|bosTau2\|chr19 (28871937-28871730)
	6-213, gnl\|Hg17\|chr17 (45984352-45984559)
	6-213, gnl\|Mm7\|chr11 (94590850-94590654)