Ss1.1-rcsk02_h23.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TCCTATTGAAGCCATAATTTATTTGGATCAAGGAAGCCCTGAAATGAATTCGACAATTAA TATTCATCGCACTTCTTCTGTGGAAGGACTCTGTGAAGGAATTGGTGCCGGACTCGTGGA CATTGCTATCTGGGTTGGGACTTGCTCAGATTACCCAAAAGGAGACGCCTCCACTGGGTG GAACTCAGTGTCTCGAATCATTATTGAAGAACTACCGAAATAAATCCTTTCGTTTTTGTT CCCTACCTCTTTTTTTTTTTTTTTATACCTTTGAATGGTTTTAGTGACAGCTTATATAAT TTTTATGTACATCTGATTAAAAAAACCCACACAACTCAATGTGTTTACAGACCAAAGTGT GATTTCACACTGTTTTTAGATCCAGCAGGATTCATTTTCCTTCAGTCAAAACTGGTTTGG GGATTTTGTAGCTGATTCAGTACTTTCTTCATATTCTTATTCCCTGAACCTATAATTTGG AATGTTATTGTCTTCATTTTTTTCCTCTTTTCTTAGGGTAGCACTTTTTAAAAATCTAAA GGCTACCAGTCTTTGTACAAGTTGTAAATGTTTATAATTGTTTTATATCTGTGAAATAAA ACTTCTTTCAAACAAAAAAAAAAAAAAAAAAAAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TCCTATTGAAGCCATAATTTATTTGGATCAAGGAAGCCCTGAAATGAATTCGACAATTAA TATTCATCGCACTTCTTCTGTGGAAGGACTCTGTGAAGGAATTGGTGCCGGACTCGTGGA CATTGCTATCTGGGTTGGGACTTGCTCAGATTACCCAAAAGGAGACGCCTCCACTGGGTG GAACTCAGTGTCTCGAATCATTATTGAAGAACTACCGAAATAAATCCTTTCGTTTTTGTT CCCTACCTCTTTTTTTTTTTTTTTATACCTTTGAATGGTTTTAGTGACAGCTTATATAAT TTTTATGTACATCTGATTAAAAAAACCCACACAACTCAATGTGTTTACAGACCAAAGTGT GATTTCACACTGTTTTTAGATCCAGCAGGATTCATTTTCCTTCAGTCAAAACTGGTTTGG GGATTTTGTAGCTGATTCAGTACTTTCTTCATATTCTTATTCCCTGAACCTATAATTTGG AATGTTATTGTCTTCATTTTTTTCCTCTTTTCTTAGGGTAGCACTTTTTAAAAATCTAAA GGCTACCAGTCTTTGTACAAGTTGTAAATGTTTATAATTGTTTTATATCTGTGAAATAAA ACTTCTTTCAAACAAAAAAAAAAAAAAAAAAAAAAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
| 64-308, gnl|bosTau2|chr14 (36257431-36257673) | |
| 64-308, gnl|canFam2|chr13 (7832569-7832735) | |
| 64-308, gnl|danRer3|chr19 (41126704-41126862) | |
| 64-308, gnl|echTel1|scaffold_283202 (39981-40145) | |
| 64-308, gnl|fr1|chrUn (130112343-130112185) | |
| 64-308, gnl|galGal2|chr2 (128122673-128122833) | |
| 64-308, gnl|hg17|chr8 (104463845-104464011) | |
| 64-308, gnl|Hg17|chr8 (104463845-104464087) | |
| 64-308, gnl|loxAfr1|scaffold_204386 (1272-1106) | |
| 64-308, gnl|mm7|chr15 (39091986-39092150) | |
| 64-308, gnl|Mm7|chr15 (39091986-39092216) | |
| 64-308, gnl|monDom2|scaffold_3 (59123600-59123434) | |
| 64-308, gnl|oryCun1|scaffold_205394 (37587-37422) | |
| 64-308, gnl|panTro1|chr7 (106856237-106856403) | |
| 64-308, gnl|rheMac2|chr8 (105902772-105902938) | |
| 64-308, gnl|rn3|chr7 (74660535-74660699) | |
| 64-308, gnl|tetNig1|chr8 (1236088-1235928) | |
| 64-308, gnl|xenTro1|scaffold_3 (5306999-5306832) | |
| 329-615, gnl|bosTau2|chr14 (36257869-36258160) | |
| 329-615, gnl|Hg17|chr8 (104464105-104464393) | |
| 329-615, gnl|Mm7|chr15 (39092259-39092495) |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 64-308, gnl|bosTau2|chr14 (36257431-36257673) | |
| 64-308, gnl|canFam2|chr13 (7832569-7832735) | |
| 64-308, gnl|danRer3|chr19 (41126704-41126862) | |
| 64-308, gnl|echTel1|scaffold_283202 (39981-40145) | |
| 64-308, gnl|fr1|chrUn (130112343-130112185) | |
| 64-308, gnl|galGal2|chr2 (128122673-128122833) | |
| 64-308, gnl|hg17|chr8 (104463845-104464011) | |
| 64-308, gnl|Hg17|chr8 (104463845-104464087) | |
| 64-308, gnl|loxAfr1|scaffold_204386 (1272-1106) | |
| 64-308, gnl|mm7|chr15 (39091986-39092150) | |
| 64-308, gnl|Mm7|chr15 (39091986-39092216) | |
| 64-308, gnl|monDom2|scaffold_3 (59123600-59123434) | |
| 64-308, gnl|oryCun1|scaffold_205394 (37587-37422) | |
| 64-308, gnl|panTro1|chr7 (106856237-106856403) | |
| 64-308, gnl|rheMac2|chr8 (105902772-105902938) | |
| 64-308, gnl|rn3|chr7 (74660535-74660699) | |
| 64-308, gnl|tetNig1|chr8 (1236088-1235928) | |
| 64-308, gnl|xenTro1|scaffold_3 (5306999-5306832) | |
| 329-615, gnl|bosTau2|chr14 (36257869-36258160) | |
| 329-615, gnl|Hg17|chr8 (104464105-104464393) | |
| 329-615, gnl|Mm7|chr15 (39092259-39092495) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nca (0.273748) | |
| ski (0.146735) | |
| csk (0.140746) |