Ss1.1-rcsk03_b9.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TTGGATAAAGATGGGGTGAGTGCAGCTGTTGTTATTGCTGAGATGGCATCTTACCTGGAA ACCATGAATATAACATTGAAACAACAACTGATTAAGGTTTATGAAAAATATGGTTATCAT ATTTCAAAAACGTCATATTTCTTGTGTTATGAGCCAACTACCATCAAAAGTATATTTGAA AGGCTTCGCAATTTTGATTCTCCAAAAGAGTACCCAAAATTTTGTGGGACATTTGCTATA TTGCATGTACGAGACATTACCACCGGCTACGACAGCAGCCAGCCTAATAAGAAATCAGTG CTGCCTGTGAGTAAAAACAGCCAGATGATTACGTTTACGTTTCAAAACGGCTGTGTTGCT ACACTTCGGACCAGTGGGACAGAACCAAAGATAAAGTATTATGCAGAGATGTGTGCATCA CCTGACCGGAATGACACTGCCTTGCTAGAAGAGGAGCTGAAGAAACTCATTGAAGCTTTG ATTGAGCATTTCCTCGAGCCCAGTAGAAATGGACTGACCTGGCGCTGTGTTTAGTGTTCA GCGGTACATCCTTGCTTTGCCCTGGCCTGTGGCACAGAACAACCAAGGACGCCATGCACT GAACTCGTGTTCACAGTCTCTGTCTGTCTCATTTGGCCGAGTATCTTTTTCCTATTTCTT TCTTACTGGGTGGCTGACTAAACAAACTGTATACATTATGAAATGGAATGGTCTGAAGAG AAATGATTCAAATTTTTTCATAATCGTAAACAAAAGTTACTGCATTAAAAGTGTTATGGT AACACGTCGTTCTTCCTTCAACAGAAACAAAACAGTACAAATGTGAGTTTTCTTATTCAA GTGTGATTCATCTTACTTCCATATTCTTGGAATTGCGTATAGCACAGTTTGTTTGTTTTA AGTAAGATGTGTGTTGTATAATTGAAGTGTTAGTTAAGGAAATTAATCCATAAGATTGGC AAGAAAATGGCACTGGTCCCAGTATACTTTGGAAAAGTGTCATCGCTACCTCATATGTAT TAACTTACACATTAGAATATTTGAAATAGGGTATCTAGTTAGCATTTGTAGCTTAGAACA GATGTCACAGTATGTGGTTTCAGCACCTCTTTCAGG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TTGGATAAAGATGGGGTGAGTGCAGCTGTTGTTATTGCTGAGATGGCATCTTACCTGGAA ACCATGAATATAACATTGAAACAACAACTGATTAAGGTTTATGAAAAATATGGTTATCAT ATTTCAAAAACGTCATATTTCTTGTGTTATGAGCCAACTACCATCAAAAGTATATTTGAA AGGCTTCGCAATTTTGATTCTCCAAAAGAGTACCCAAAATTTTGTGGGACATTTGCTATA TTGCATGTACGAGACATTACCACCGGCTACGACAGCAGCCAGCCTAATAAGAAATCAGTG CTGCCTGTGAGTAAAAACAGCCAGATGATTACGTTTACGTTTCAAAACGGCTGTGTTGCT ACACTTCGGACCAGTGGGACAGAACCAAAGATAAAGTATTATGCAGAGATGTGTGCATCA CCTGACCGGAATGACACTGCCTTGCTAGAAGAGGAGCTGAAGAAACTCATTGAAGCTTTG ATTGAGCATTTCCTCGAGCCCAGTAGAAATGGACTGACCTGGCGCTGTGTTTAGTGTTCA GCGGTACATCCTTGCTTTGCCCTGGCCTGTGGCACAGAACAACCAAGGACGCCATGCACT GAACTCGTGTTCACAGTCTCTGTCTGTCTCATTTGGCCGAGTATCTTTTTCCTATTTCTT TCTTACTGGGTGGCTGACTAAACAAACTGTATACATTATGAAATGGAATGGTCTGAAGAG AAATGATTCAAATTTTTTCATAATCGTAAACAAAAGTTACTGCATTAAAAGTGTTATGGT AACACGTCGTTCTTCCTTCAACAGAAACAAAACAGTACAAATGTGAGTTTTCTTATTCAA GTGTGATTCATCTTACTTCCATATTCTTGGAATTGCGTATAGCACAGTTTGTTTGTTTTA AGTAAGATGTGTGTTGTATAATTGAAGTGTTAGTTAAGGAAATTAATCCATAAGATTGGC AAGAAAATGGCACTGGTCCCAGTATACTTTGGAAAAGTGTCATCGCTACCTCATATGTAT TAACTTACACATTAGAATATTTGAAATAGGGTATCTAGTTAGCATTTGTAGCTTAGAACA GATGTCACAGTATGTGGTTTCAGCACCTCTTTCAGG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 108-299, gnl|bosTau2|chr15 (34219921-34219730) | |
| 108-299, gnl|canFam2|chr21 (26967122-26966973) | |
| 108-299, gnl|danRer3|chr15 (7902263-7902114) | |
| 108-299, gnl|dasNov1|scaffold_9416 (80977-80828) | |
| 108-299, gnl|echTel1|scaffold_301659 (90285-90136) | |
| 108-299, gnl|fr1|chrUn (236896903-236896751) | |
| 108-299, gnl|galGal2|chr1 (186903230-186903379) | |
| 108-299, gnl|hg17|chr11 (73731149-73731298) | |
| 108-299, gnl|Hg17|chr11 (73731343-73731152) | |
| 108-299, gnl|loxAfr1|scaffold_27881 (7991-7843) | |
| 108-299, gnl|mm7|chr7 (96314555-96314406) | |
| 108-299, gnl|Mm7|chr7 (96314359-96314550) | |
| 108-299, gnl|monDom2|scaffold_74 (3097523-3097374) | |
| 108-299, gnl|oryCun1|scaffold_213188 (12123-12276) | |
| 108-299, gnl|panTro1|chr9 (75015973-75016122) | |
| 108-299, gnl|rheMac2|chr14 (72522938-72523087) | |
| 108-299, gnl|rn3|chr1 (157723613-157723464) | |
| 108-299, gnl|tetNig1|chrUn_random (135708402-135708550) | |
| 108-299, gnl|xenTro1|scaffold_2385 (35818-35669) | |
| 432-1116, gnl|bosTau2|chr15 (34214083-34213407) | |
| 432-1116, gnl|Hg17|chr11 (73725447-73724755) | |
| 432-1116, gnl|Mm7|chr7 (96318569-96319419) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 108-299, gnl|bosTau2|chr15 (34219921-34219730) | |
| 108-299, gnl|canFam2|chr21 (26967122-26966973) | |
| 108-299, gnl|danRer3|chr15 (7902263-7902114) | |
| 108-299, gnl|dasNov1|scaffold_9416 (80977-80828) | |
| 108-299, gnl|echTel1|scaffold_301659 (90285-90136) | |
| 108-299, gnl|fr1|chrUn (236896903-236896751) | |
| 108-299, gnl|galGal2|chr1 (186903230-186903379) | |
| 108-299, gnl|hg17|chr11 (73731149-73731298) | |
| 108-299, gnl|Hg17|chr11 (73731343-73731152) | |
| 108-299, gnl|loxAfr1|scaffold_27881 (7991-7843) | |
| 108-299, gnl|mm7|chr7 (96314555-96314406) | |
| 108-299, gnl|Mm7|chr7 (96314359-96314550) | |
| 108-299, gnl|monDom2|scaffold_74 (3097523-3097374) | |
| 108-299, gnl|oryCun1|scaffold_213188 (12123-12276) | |
| 108-299, gnl|panTro1|chr9 (75015973-75016122) | |
| 108-299, gnl|rheMac2|chr14 (72522938-72523087) | |
| 108-299, gnl|rn3|chr1 (157723613-157723464) | |
| 108-299, gnl|tetNig1|chrUn_random (135708402-135708550) | |
| 108-299, gnl|xenTro1|scaffold_2385 (35818-35669) | |
| 432-1116, gnl|bosTau2|chr15 (34214083-34213407) | |
| 432-1116, gnl|Hg17|chr11 (73725447-73724755) | |
| 432-1116, gnl|Mm7|chr7 (96318569-96319419) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| csk (0.140746) | |
| bla (0.124347) | |
| eje (0.0988338) |