Non-Coding RNA Search

Ss1.1-rcsk04_m3.5

Sequence:


               
               ATGGCCATGTAGGAGAGTCATTAGCAATGTATTCCATGGGCTGCAACACCCCATTTCCAA
TCTTAGTTCTTAGTACTTAAATAGTGGCATGACCTTGGGCATGTAGCTTAAGGTCTCTGT
GCCTCAGTTGCTACATCTGCAACATGGGAATGAAAACACAAGTTATTCATTCAACAGATT
TTTATTAAGCGTGTTCTACATGCCCAGCACTGTGCTAGGCATTGGGGACACATCAGTGGA
CAAAACAGGCCCGGTGGAGTTTACATTCTAGCAGGGCTAAGAGACAGTGAGCAAACAGGT
AAGTAGATTATGTCACATGATAGAAGAGGGGTGGGAATACAAAGATCATTGTTTTAAATA
GGGCGATCAGGGGAGTTCCCGTGTGGCTCAACGGGTTGAGGATCCCACAACTCCGATCGC
TGCCCTGGTGAGGGTTCGATCCCTGTCCGCAGGAACTTCTGAATACCATGGCAAAAATAA
AAAATAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATGGCCATGTAGGAGAGTCATTAGCAATGTATTCCATGGGCTGCAACACCCCATTTCCAA
TCTTAGTTCTTAGTACTTAAATAGTGGCATGACCTTGGGCATGTAGCTTAAGGTCTCTGT
GCCTCAGTTGCTACATCTGCAACATGGGAATGAAAACACAAGTTATTCATTCAACAGATT
TTTATTAAGCGTGTTCTACATGCCCAGCACTGTGCTAGGCATTGGGGACACATCAGTGGA
CAAAACAGGCCCGGTGGAGTTTACATTCTAGCAGGGCTAAGAGACAGTGAGCAAACAGGT
AAGTAGATTATGTCACATGATAGAAGAGGGGTGGGAATACAAAGATCATTGTTTTAAATA
GGGCGATCAGGGGAGTTCCCGTGTGGCTCAACGGGTTGAGGATCCCACAACTCCGATCGC
TGCCCTGGTGAGGGTTCGATCCCTGTCCGCAGGAACTTCTGAATACCATGGCAAAAATAA
AAAATAAAAAAA

Aligned organism(s): 1 entry(ies)

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Aligned organism(s): 1 entry(ies)

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               11-374, gnl|bosTau2|chr18 (41419184-41419564)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               11-374, gnl|bosTau2|chr18 (41419184-41419564)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               cje (0.165235)
               

               
               csk (0.140746)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cje (0.165235)
               

               
               csk (0.140746)