Non-Coding RNA Search

Ss1.1-rcsk08_b11.5

Sequence:


               
               AAAATTCAGGTATTATTGAATTAGCGTCTCATCCACTTCCTTTCTTCTCTTTCTAAAATA
TTGGGCACACGGGTGTCTTTAACGAAAAAAATCACACAGTCACACAGAAAAAAATTCCGT
TTGGTAAGAGTCCTTCCAACGAAATCTCAGGAATAATTAAACTCTAGGGGGGGCTTTCCT
AAAAAGAGCTAGAGGAACCTAGTTTCCTCTTCTTTTTTTTTTTTTAAGTTTAGACCGTAG
ATTATTTATTAAAATTCTTTAATAATAGGAAGAGGGGAAAGTATTTATTGTACATTATTT
TCATAGATTAAATAAATGTCTTTATAATACGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAAATTCAGGTATTATTGAATTAGCGTCTCATCCACTTCCTTTCTTCTCTTTCTAAAATA
TTGGGCACACGGGTGTCTTTAACGAAAAAAATCACACAGTCACACAGAAAAAAATTCCGT
TTGGTAAGAGTCCTTCCAACGAAATCTCAGGAATAATTAAACTCTAGGGGGGGCTTTCCT
AAAAAGAGCTAGAGGAACCTAGTTTCCTCTTCTTTTTTTTTTTTTAAGTTTAGACCGTAG
ATTATTTATTAAAATTCTTTAATAATAGGAAGAGGGGAAAGTATTTATTGTACATTATTT
TCATAGATTAAATAAATGTCTTTATAATACGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-331, gnl|bosTau2|chr19 (30598739-30598417)
               

               
               1-331, gnl|Hg17|chr17 (43975324-43975020)
               

               
               1-331, gnl|Mm7|chr11 (96462771-96463051)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-331, gnl|bosTau2|chr19 (30598739-30598417)
               

               
               1-331, gnl|Hg17|chr17 (43975324-43975020)
               

               
               1-331, gnl|Mm7|chr11 (96462771-96463051)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               fbs (0.175346)
               

               
               csk (0.140746)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fbs (0.175346)
               

               
               csk (0.140746)

	1-331, gnl\|bosTau2\|chr19 (30598739-30598417)
	1-331, gnl\|Hg17\|chr17 (43975324-43975020)
	1-331, gnl\|Mm7\|chr11 (96462771-96463051)