Non-Coding RNA Search

Ss1.1-rcsk14_b2B06.5

Sequence:


               
               CGTGTATCTTTCACAATAATAAGGGTATTGAAAGATAAGGCCCTTAAGGAAAAACACCCT
CGCTACTGCTTCATTCTCCTGTCCATCCAAATTTGTAATATACGAACACGGGCCTACATA
CTCCGTTTCTTAAGAAAGTATGTATGTTATGTGTATGATGGGGAGAGAACAAGTCCTTAT
TGTAGTGCTTTGATTAAAGGAGGATTTGCAAGTTTGGCTTCCTGGAGGGTTTTTATATTC
CAGGGCAAGGCACTAGACGGGATTAGTAAGTGGTATGCATTTCTTTTGTCAAGTGGGAAA
AAAGTGTTTGTGAAGGAGGGAATGAGAAAGAGCCTGCCATGGTACCTTAGCTTCAGCTCT
GTTCTGGGAAAGATCAGCAATAGGGAGGATGGAAGTTGAGGATCTGGAATTTGATTGCTT
TAAAAGGATCTGTGCTCACATACCTCTTGGTCTTCTTATAGCTCCAAAGGTACCTCAGTT
TGTAGGCTGCTGATACAGAACAGACAGAGCAGGTCCATCACACATATAACTGTAGCTACA
GCAAGACACCCGAACTAGTGAAAGAAGACTAATATTTGGAGATGAAGCTTCTCTGAAATA
AAGACAGCTGTGATCTACATACTCTGAGGGCACACTCTATGTCTCTACCTCGCACAGTTG
CTGGGCCTCAGAGGGAAAGAAAGGTTCTTTGAGGAACCAGGCAGATGGGTCAAGGATTTT
TATAAGGCCCAGGGCGGGGGGGATTATGTTGGCCTCAGATTTCATTCAGTGCAAGAAAGT
GGAATATACCTAAATGATTTTGAAGAAAAGACTAGATAACTTAGAGAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGTGTATCTTTCACAATAATAAGGGTATTGAAAGATAAGGCCCTTAAGGAAAAACACCCT
CGCTACTGCTTCATTCTCCTGTCCATCCAAATTTGTAATATACGAACACGGGCCTACATA
CTCCGTTTCTTAAGAAAGTATGTATGTTATGTGTATGATGGGGAGAGAACAAGTCCTTAT
TGTAGTGCTTTGATTAAAGGAGGATTTGCAAGTTTGGCTTCCTGGAGGGTTTTTATATTC
CAGGGCAAGGCACTAGACGGGATTAGTAAGTGGTATGCATTTCTTTTGTCAAGTGGGAAA
AAAGTGTTTGTGAAGGAGGGAATGAGAAAGAGCCTGCCATGGTACCTTAGCTTCAGCTCT
GTTCTGGGAAAGATCAGCAATAGGGAGGATGGAAGTTGAGGATCTGGAATTTGATTGCTT
TAAAAGGATCTGTGCTCACATACCTCTTGGTCTTCTTATAGCTCCAAAGGTACCTCAGTT
TGTAGGCTGCTGATACAGAACAGACAGAGCAGGTCCATCACACATATAACTGTAGCTACA
GCAAGACACCCGAACTAGTGAAAGAAGACTAATATTTGGAGATGAAGCTTCTCTGAAATA
AAGACAGCTGTGATCTACATACTCTGAGGGCACACTCTATGTCTCTACCTCGCACAGTTG
CTGGGCCTCAGAGGGAAAGAAAGGTTCTTTGAGGAACCAGGCAGATGGGTCAAGGATTTT
TATAAGGCCCAGGGCGGGGGGGATTATGTTGGCCTCAGATTTCATTCAGTGCAAGAAAGT
GGAATATACCTAAATGATTTTGAAGAAAAGACTAGATAACTTAGAGAT

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               2-828, gnl|bosTau2|chr13 (20954943-20955739)
               

               
               2-828, gnl|Hg17|chr10 (31251122-31250333)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-828, gnl|bosTau2|chr13 (20954943-20955739)
               

               
               2-828, gnl|Hg17|chr10 (31251122-31250333)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               aor (0.195274)
               

               
               csk (0.140746)
               

               
               cbl (0.114797)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               aor (0.195274)
               

               
               csk (0.140746)
               

               
               cbl (0.114797)

	2-828, gnl\|bosTau2\|chr13 (20954943-20955739)
	2-828, gnl\|Hg17\|chr10 (31251122-31250333)