Non-Coding RNA Search

Ss1.1-rcsk16_f24.5

Sequence:


               
               TGGGGATCTAATTGGCAGGTTCTTGGATACTTCCCGTCCCTGAGTCTCTATGCTTCAAAG
AAGAGGGTGTCCCATTTCTGTGTCTTCGCTTTTTCATTTTAGGGAAAGACCCTCAACTTG
ACCTTTGACCAGGGACTTCTTTCATGAGAGCTCTGCTTTTCTTTCAGTTTCAAATTGCCA
CTGTAACCGAAAAAGGTGTTGAAATAGAAGGACCCCTGTCTGCAGAGACCAACTGGGATA
TTGCCCACATGATCAGGTGATTGAAATTACAGTTAAAAAAAAAAAAGTAGTTGGTAGAAA
AGTTGGGAGACCCCTTGGTTGAACTAAGCTTAGTTTTTCTGGTGGTCTCAACCAAAAAAT
TCTCTGGGTGGAGAGGGTTTGGGTTGAGGATAGAGCTGCTTTTAGGAATTGATGTCTTAC
TCTATGGCTTCACAATCTTACATGGTTTTTTTCTTTTCAGTGGCTTTGAATGAAATATAG
ATAGATGCATTTTCCAGAACTGAAGTGGTACCCTTCTTCTAACTTTGAACGTGGCTGGTT
CAGAGATACAGTTCTTTTGTAAAATAAATAAATCCTTTAAAACAAAAAAAAAAAAAAAAA
AAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGGGGATCTAATTGGCAGGTTCTTGGATACTTCCCGTCCCTGAGTCTCTATGCTTCAAAG
AAGAGGGTGTCCCATTTCTGTGTCTTCGCTTTTTCATTTTAGGGAAAGACCCTCAACTTG
ACCTTTGACCAGGGACTTCTTTCATGAGAGCTCTGCTTTTCTTTCAGTTTCAAATTGCCA
CTGTAACCGAAAAAGGTGTTGAAATAGAAGGACCCCTGTCTGCAGAGACCAACTGGGATA
TTGCCCACATGATCAGGTGATTGAAATTACAGTTAAAAAAAAAAAAGTAGTTGGTAGAAA
AGTTGGGAGACCCCTTGGTTGAACTAAGCTTAGTTTTTCTGGTGGTCTCAACCAAAAAAT
TCTCTGGGTGGAGAGGGTTTGGGTTGAGGATAGAGCTGCTTTTAGGAATTGATGTCTTAC
TCTATGGCTTCACAATCTTACATGGTTTTTTTCTTTTCAGTGGCTTTGAATGAAATATAG
ATAGATGCATTTTCCAGAACTGAAGTGGTACCCTTCTTCTAACTTTGAACGTGGCTGGTT
CAGAGATACAGTTCTTTTGTAAAATAAATAAATCCTTTAAAACAAAAAAAAAAAAAAAAA
AAAAAAAAAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               140-582, gnl|bosTau2|chr3 (11678474-11678053)
               

               
               140-582, gnl|Hg17|chr1 (148187066-148187483)
               

               
               140-582, gnl|Mm7|chr3 (94758736-94758277)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               140-582, gnl|bosTau2|chr3 (11678474-11678053)
               

               
               140-582, gnl|Hg17|chr1 (148187066-148187483)
               

               
               140-582, gnl|Mm7|chr3 (94758736-94758277)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               gul (0.177588)
               

               
               csk (0.140746)
               

               
               kid (0.129735)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               gul (0.177588)
               

               
               csk (0.140746)
               

               
               kid (0.129735)

	140-582, gnl\|bosTau2\|chr3 (11678474-11678053)
	140-582, gnl\|Hg17\|chr1 (148187066-148187483)
	140-582, gnl\|Mm7\|chr3 (94758736-94758277)