Non-Coding RNA Search

Ss1.1-rcsk21_g17.5

Sequence:


               
               GCCTGAGTGTATCTCCAGCACATGGAACAAATAAAACAGTCATGTAAAATCACTGACCTT
ATGATGGCAATTGGCATAACTCTTCTTGCTGTTTGGAATCGCCAGGTAGCTCAGGCAATA
TTTTAAAAGAACTAAACATGAAATATGTGCTTAAGTAGGTGGGAAGAACTTGCAATATGT
GCCAAATGCCTTATCAATTTCACAGATAATATAAATAAAAATCCAACCACATATTTAGAC
CAGGGTTAACCCTTGAAGAAAAAAAATCTGGTTACACAGCCAAGTGCACAAGCTACCAAG
CACTCCTACCTTAATAATTGCACTAGATGAAACAAACCTCAAATTAGGAAATGTTTCCTG
GGATGGAAATTCCATAAGAGAGCAGCAAACAGAGTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCCTGAGTGTATCTCCAGCACATGGAACAAATAAAACAGTCATGTAAAATCACTGACCTT
ATGATGGCAATTGGCATAACTCTTCTTGCTGTTTGGAATCGCCAGGTAGCTCAGGCAATA
TTTTAAAAGAACTAAACATGAAATATGTGCTTAAGTAGGTGGGAAGAACTTGCAATATGT
GCCAAATGCCTTATCAATTTCACAGATAATATAAATAAAAATCCAACCACATATTTAGAC
CAGGGTTAACCCTTGAAGAAAAAAAATCTGGTTACACAGCCAAGTGCACAAGCTACCAAG
CACTCCTACCTTAATAATTGCACTAGATGAAACAAACCTCAAATTAGGAAATGTTTCCTG
GGATGGAAATTCCATAAGAGAGCAGCAAACAGAGTG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               47-259, gnl|bosTau2|chr24 (19488730-19488949)
               

               
               47-259, gnl|Hg17|chr18 (27189587-27189791)
               

               
               47-259, gnl|Mm7|chr18 (20714758-20714945)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               47-259, gnl|bosTau2|chr24 (19488730-19488949)
               

               
               47-259, gnl|Hg17|chr18 (27189587-27189791)
               

               
               47-259, gnl|Mm7|chr18 (20714758-20714945)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               csk (0.281492)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               csk (0.281492)

	47-259, gnl\|bosTau2\|chr24 (19488730-19488949)
	47-259, gnl\|Hg17\|chr18 (27189587-27189791)
	47-259, gnl\|Mm7\|chr18 (20714758-20714945)