Ss1.1-rcsk29_d2.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CAGTGGCCGGGAGAGGATTTATAACATTTTCTTTCGTCGTCGACAATATTGCAAAATGTG TCAAAGTGACGGCATCTCCTGGACAGGACCGTGAGGGAGCGGACAAGCGTTTCCCCCCTA CCGGAAATCTGATGGGCTTATGACATCATGGCTGGCTGCTGAGCGATGAAGAGGATGCCA CAAAGAAATCCGACATATCAGATGAATTCTGAAATCAGTTTCCCTCCGGCTGTAGGAACA GGCGTGAAGTCAGGAGACTGTGAGCTTTGTTTAAAAAACAAAAAATAAAACTAAGATACG ACCTGTATTAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CAGTGGCCGGGAGAGGATTTATAACATTTTCTTTCGTCGTCGACAATATTGCAAAATGTG TCAAAGTGACGGCATCTCCTGGACAGGACCGTGAGGGAGCGGACAAGCGTTTCCCCCCTA CCGGAAATCTGATGGGCTTATGACATCATGGCTGGCTGCTGAGCGATGAAGAGGATGCCA CAAAGAAATCCGACATATCAGATGAATTCTGAAATCAGTTTCCCTCCGGCTGTAGGAACA GGCGTGAAGTCAGGAGACTGTGAGCTTTGTTTAAAAAACAAAAAATAAAACTAAGATACG ACCTGTATTAAA |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 182-289, + strand, RNAz p=0.718002 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 182-289, + strand, RNAz p=0.718002 |
| Aligned organism(s): 3 entry(ies) | More info |
| Aligned organism(s): 3 entry(ies) | Help | Less info |
| 106-312, gnl|bosTau2|chr5 (68899999-68899793) | |
| 106-312, gnl|Hg17|chr22 (41085231-41085011) | |
| 106-312, gnl|Mm7|chr15 (83067372-83067141) |
| Aligned organism(s): 3 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 106-312, gnl|bosTau2|chr5 (68899999-68899793) | |
| 106-312, gnl|Hg17|chr22 (41085231-41085011) | |
| 106-312, gnl|Mm7|chr15 (83067372-83067141) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| fce (0.271592) | |
| cki (0.165235) | |
| csk (0.140746) |