Non-Coding RNA Search

Ss1.1-rcsp04b_o21.5

Sequence:


               
               GTCAATAACTGCATCCAGCAGCTGGCCCAGACCCGCAGCCGGGGCCAGCCCCCAGATGGT
GCCTGGGGCGAGGGCCAGAACATGCTGATGATCCTGAAGAAGGATGCCATGAGTCTGGTG
AATCCCCTGGACCACAGTCTCATCCACTGCCAGCCTCTGGTGCACATCCGTGTATGGGGT
GTGGGCAGCTCCAAGGGCCGGTGAGGACCCCCATGTCCCTCAAAGTGAGCCTCGCTCCTC
CCTCCCCCTTGCAGGCTGTGATCCCCACTAATGCTGATCCCCTGTAACTTGAACCCCTGG
ACACAGATCCTTTGACATGGACCCAAGCTCTGCCTCCCCTGCCTGGTCCAGCCCTGGTTG
GGGAGGGTGGGCCCCGCTCAGAAAGGACAGATGGGGGAGAGCCTGAGAGTCTGGGCTGAT
TCTCTTCTGTGCTCCCACATGCTTCTGGAACAGTGACAGGTGAGTCACAGCCAGATGCCT
TGAGCCCCAGTCCTGGGCTCCCTATTCCATCCCTGCCATAACCCTGACTTTCCAGCTTCC
TGCAGGCACTAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTCAATAACTGCATCCAGCAGCTGGCCCAGACCCGCAGCCGGGGCCAGCCCCCAGATGGT
GCCTGGGGCGAGGGCCAGAACATGCTGATGATCCTGAAGAAGGATGCCATGAGTCTGGTG
AATCCCCTGGACCACAGTCTCATCCACTGCCAGCCTCTGGTGCACATCCGTGTATGGGGT
GTGGGCAGCTCCAAGGGCCGGTGAGGACCCCCATGTCCCTCAAAGTGAGCCTCGCTCCTC
CCTCCCCCTTGCAGGCTGTGATCCCCACTAATGCTGATCCCCTGTAACTTGAACCCCTGG
ACACAGATCCTTTGACATGGACCCAAGCTCTGCCTCCCCTGCCTGGTCCAGCCCTGGTTG
GGGAGGGTGGGCCCCGCTCAGAAAGGACAGATGGGGGAGAGCCTGAGAGTCTGGGCTGAT
TCTCTTCTGTGCTCCCACATGCTTCTGGAACAGTGACAGGTGAGTCACAGCCAGATGCCT
TGAGCCCCAGTCCTGGGCTCCCTATTCCATCCCTGCCATAACCCTGACTTTCCAGCTTCC
TGCAGGCACTAT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               71-550, gnl|bosTau2|chr7 (30569102-30569580)
               

               
               71-550, gnl|Hg17|chr5 (139921998-139921522)
               

               
               71-550, gnl|Mm7|chr18 (37053194-37052720)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               71-550, gnl|bosTau2|chr7 (30569102-30569580)
               

               
               71-550, gnl|Hg17|chr5 (139921998-139921522)
               

               
               71-550, gnl|Mm7|chr18 (37053194-37052720)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               csp (0.161186)
               

               
               eep (0.122564)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               csp (0.161186)
               

               
               eep (0.122564)

	71-550, gnl\|bosTau2\|chr7 (30569102-30569580)
	71-550, gnl\|Hg17\|chr5 (139921998-139921522)
	71-550, gnl\|Mm7\|chr18 (37053194-37052720)